PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G26100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 118aa    MW: 11845 Da    PI: 5.8395
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G26100.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof37.16.5e-127798526
           zf-Dof  5 alkcprCdstntkfCyynnysl 26
                      l+cprC s++tkfCy+nny+ 
  OPUNC01G26100.1 77 PLPCPRCGSRETKFCYFNNYND 98
                     689*****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-77697IPR003851Zinc finger, Dof-type
PfamPF027014.2E-97798IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MANLPSTAAA ADASGFKLFG KVIQPDGQRG VEESAAAQAP PHPPAPPVME AAAGTSQTLQ  60
AAGGGGGGGG GGGGGEPLPC PRCGSRETKF CYFNNYNDSF GGQMDEASNE RDKKRKFG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0032231e-100AP003223.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0007F06.
GenBankAP0032641e-100AP003264.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0485G01.
GenBankAP0149571e-100AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015619286.18e-26dof zinc finger protein 5-like
TrEMBLA0A0E0JMA42e-78A0A0E0JMA4_ORYPU; Uncharacterized protein
STRINGOPUNC01G26100.13e-79(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP147161620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47655.18e-09Dof family protein