PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G18690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 107aa MW: 11739.2 Da PI: 9.6861 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.00039 | 37 | 60 | 1 | 24 |
CHHHHHHHHHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLr 24 +++ + erE+ Rd++N+ f eL ONIVA11G18690.1 37 KKTHKAEREKLKRDQLNDLFVELS 60 678899***************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 1.2E-6 | 34 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-9 | 36 | 104 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MVADTESSGS LGGSSNAASD KAVDGSLDKR SQEKAPKKTH KAEREKLKRD QLNDLFVELS 60 NPERQNSGKA TVLGDAARVL RDLVSQVESL RKEQSALLTE RQYLILK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress. {ECO:0000269|PubMed:25617318}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK068017 | 1e-153 | AK068017.1 Oryza sativa Japonica Group cDNA clone:J013132D22, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015617819.1 | 2e-55 | transcription factor BHLH062-like isoform X1 | ||||
Refseq | XP_015617820.1 | 2e-55 | transcription factor BHLH062-like isoform X2 | ||||
Refseq | XP_015617821.1 | 2e-55 | transcription factor BHLH062-like isoform X2 | ||||
Swissprot | Q69V10 | 5e-27 | BH062_ORYSJ; Transcription factor BHLH062 | ||||
TrEMBL | A0A0E0J3Y1 | 3e-69 | A0A0E0J3Y1_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA11G18690.1 | 4e-70 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12959 | 21 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.3 | 1e-21 | bHLH family protein |
Publications ? help Back to Top | |||
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