PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G10840.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 191aa    MW: 20536.1 Da    PI: 9.1356
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G10840.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.12.7e-11161181222
                      --SS-EEEEEEE--TT-SS-E CS
             WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                       Dgy+WrKYGqK++k++++pr
  ONIVA11G10840.1 161 ADGYKWRKYGQKSIKNNPHPR 181
                      6*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-10157182IPR003657WRKY domain
SuperFamilySSF1182908.11E-9158182IPR003657WRKY domain
SMARTSM007743.1E-5160191IPR003657WRKY domain
PROSITE profilePS5081111.508162191IPR003657WRKY domain
PfamPF031064.7E-8162182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MYGQSPHKQR RRFPGPYLMG DVLRAQATAS AEEVAGGVWP CELDDHLIGE LLGDDGLFVP  60
AAEHPTLYYS FGAGSSAAAA AAPCNGGGSA DHERRPRPAP AVSRDLCSVY SGPTIRDIEK  120
ALSSSASPRP PYPSGRRYSS LVEAESKYTS KVRSCGGKMP ADGYKWRKYG QKSIKNNPHP  180
RCATRSIIDP I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8355090.0CT835509.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014N20, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015635485.11e-117WRKY transcription factor WRKY28
TrEMBLA0A0E0J1591e-137A0A0E0J159_ORYNI; Uncharacterized protein
STRINGONIVA11G10840.11e-138(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131442633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-11WRKY DNA-binding protein 49