PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G08980.5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Nin-like
Protein Properties Length: 984aa    MW: 108755 Da    PI: 6.3792
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G08980.5genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK92.53.1e-29624674252
           RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++
  ONIVA11G08980.5 624 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 674
                      799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.348613694IPR003035RWP-RK domain
PfamPF020424.5E-26627674IPR003035RWP-RK domain
SuperFamilySSF542771.83E-23871966No hitNo description
Gene3DG3DSA:3.10.20.2405.9E-25877959No hitNo description
SMARTSM006664.1E-26880962IPR000270PB1 domain
PROSITE profilePS5174527.129880962IPR000270PB1 domain
PfamPF005649.3E-19880961IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 984 aa     Download sequence    Send to blast
MPPLPISPLT RTVNSSLFHF LFSSSSPPAA SGRPASRAEQ RREPTSIWAP IEAEAVRIEK  60
MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV  120
STPVGSNSRQ DDSDVSITKE GTTTRRGDCA AGLASGEPVA AGIGSVPKPF DGVTLTERML  180
RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE  240
GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARR HEVRGSLAMP VFNSSGGSCC  300
AVLEVVMTRE KDNFCLEMVN VSNALQAFNN PLFLLCAAQR YAQLQCNTAK YLFKELSTSY  360
SRDQKLALME IFDVLQAVCQ AHLLPLALAW IPVCSKRDVL VSVEYGANFG KRNKEVLCIE  420
ESACYVNDTR MRDFVQVCAE HPLEKGQGVA GNAYLSNNPF FSSDVKDYDM HAYPLVNHAR  480
KFGLHAAVAI RLRSTYTKND DYVLEFFLPV LCKGGGEQQL LLDSISVTMR RVCKSLRTVS  540
DAELKEDVTR KPSNENRSGT RCPSPVNLIY SGREIDVSNE TKTNTPLEYQ IEGIDEQLSD  600
TKSTNKLIKC SNASDGEKRR SSTEKSVSLS VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ  660
HGISRWPSRK IKKVNRSLKK IQNVISSVHG VEGVLKYDPS TGCLVSSVSP SIEPVLMNVE  720
HKGSDPLPIE SELPHLNFEP DCDAYRREHA GQDVLQKLQN KQNGEINFDM DDGELFRNSH  780
STRTLSGAFC EDMPNGLYVA REMTCVAKTG TRTERLEHKP SSRDTFSAPQ EYRMESETDK  840
SNKNSKQSLP SSSSMTDCST SSGETFKSIK SQSANESNKT VAVKASYKND TIRFKLLPSM  900
KYEQLLEEIA KRLKLSIGLF QLKYKDDEGD WVILASDADL QECLEILDTT RLRILKLQVQ  960
DVVCPIGSSS ERCGFGSTVI DLFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0648590.0AK064859.1 Oryza sativa Japonica Group cDNA clone:J013000H14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616880.10.0protein NLP2-like isoform X1
RefseqXP_015616881.10.0protein NLP2-like isoform X1
TrEMBLA0A0E0J0G60.0A0A0E0J0G6_ORYNI; Uncharacterized protein
STRINGONIVA11G08980.10.0(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-174Nin-like family protein