PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G08980.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Nin-like
Protein Properties Length: 952aa    MW: 105092 Da    PI: 6.1995
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G08980.10genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK92.53e-29592642252
            RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++
  ONIVA11G08980.10 592 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 642
                       799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.348581662IPR003035RWP-RK domain
PfamPF020424.3E-26595642IPR003035RWP-RK domain
SuperFamilySSF542771.73E-23839934No hitNo description
Gene3DG3DSA:3.10.20.2405.6E-25845927No hitNo description
PROSITE profilePS5174527.129848930IPR000270PB1 domain
PfamPF005648.9E-19848929IPR000270PB1 domain
SMARTSM006664.1E-26848930IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 952 aa     Download sequence    Send to blast
MPPLPISPLT RTVNSSLFHF LFSSSSPPAA SGRPASRAEQ RREPTSIWAP IEAEAVRIEK  60
MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV  120
STPVGSNSRQ DDSDVSITKE GTTTRRGDCA AGLASGEPVA AGIGSVPKPF DGVTLTERML  180
RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE  240
GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARR HEVRGSLAMP VFNSSGGSCC  300
AVLEVVMTRE KDNFCLEMVN VSNALQSYSR DQKLALMEIF DVLQAVCQAH LLPLALAWIP  360
VCSKRDVLVS VEYGANFGKR NKEVLCIEES ACYVNDTRMR DFVQVCAEHP LEKGQGVAGN  420
AYLSNNPFFS SDVKDYDMHA YPLVNHARKF GLHAAVAIRL RSTYTKNDDY VLEFFLPVLC  480
KGGGEQQLLL DSISVTMRRV CKSLRTVSDA ELKEDVTRKP SNENRSGTRC PSPVNLIYSG  540
REIDVSNETK TNTPLEYQIE GIDEQLSDTK STNKLIKCSN ASDGEKRRSS TEKSVSLSVL  600
QQYFSGSLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIK KVNRSLKKIQ NVISSVHGVE  660
GVLKYDPSTG CLVSSVSPSI EPVLMNVEHK GSDPLPIESE LPHLNFEPDC DAYRREHAGQ  720
DVLQKLQNKQ NGEINFDMDD GELFRNSHST RTLSGAFCED MPNGLYVARE MTCVAKTGTR  780
TERLEHKPSS RDTFSAPQEY RMESETDKSN KNSKQSLPSS SSMTDCSTSS GETFKSIKSQ  840
SANESNKTVA VKASYKNDTI RFKLLPSMKY EQLLEEIAKR LKLSIGLFQL KYKDDEGDWV  900
ILASDADLQE CLEILDTTRL RILKLQVQDV VCPIGSSSER CGFGSTVIDL FI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0648590.0AK064859.1 Oryza sativa Japonica Group cDNA clone:J013000H14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616880.10.0protein NLP2-like isoform X1
RefseqXP_015616881.10.0protein NLP2-like isoform X1
TrEMBLA0A0E0J0G00.0A0A0E0J0G0_ORYNI; Uncharacterized protein
STRINGONIVA11G08980.10.0(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-174Nin-like family protein