PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G06910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 364aa MW: 40242.6 Da PI: 9.8858 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.5 | 5.1e-07 | 232 | 277 | 17 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 A+rsR RK+++i+eLe+kv++L++e + e+e l+++ l+ e ONIVA11G06910.1 232 AQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLE 277 89***********************999999999888887666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-5 | 221 | 280 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.43E-15 | 222 | 272 | No hit | No description |
SuperFamily | SSF57959 | 6.88E-6 | 231 | 274 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-7 | 232 | 274 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence Send to blast |
MMMANAKLPK QALLPPRSPF PTAAAAAGPY AGDHGPIARP QGAPHHRHGH GHGHHQRTSS 60 ESFIEEQPSW LDDLLNEPET PVRQHGRAGH RRSSSDSFAM FDGGAAAGAY ANGFEGMGGG 120 GGGGQAAPWG GVQEYYAKPS SFGRHQGRPW EQGMNNLVNY RQSGGPPMPA KEKVGGHHGS 180 PSVLRDHDHG MDRRSSDESG HDQKVGPERK EGVPPKHAQS EADTKRAKQQ YAQRSRVRKL 240 QYIAELERKV QALQSEGIDV SAEMEFLSQQ NIMLDLENKA LKQRLESLAQ EQLIKRFQQE 300 MFEREIGRLR SLYQQQQQQQ KQPQPTTTLS RSNSRDLDSQ FANLSLKHKD PNSGPLRTQS 360 SSIL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK072267 | 0.0 | AK072267.1 Oryza sativa Japonica Group cDNA clone:J023004I18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015617316.1 | 0.0 | uncharacterized protein At4g06598 | ||||
TrEMBL | A0A0E0IZQ5 | 0.0 | A0A0E0IZQ5_ORYNI; Uncharacterized protein | ||||
TrEMBL | A0A0E0R5W5 | 0.0 | A0A0E0R5W5_ORYRU; Uncharacterized protein | ||||
TrEMBL | Q2R8T2 | 0.0 | Q2R8T2_ORYSJ; BZIP transcription factor family protein, expressed | ||||
STRING | ORUFI11G07090.1 | 0.0 | (Oryza rufipogon) | ||||
STRING | OS11T0218000-01 | 0.0 | (Oryza sativa) | ||||
STRING | ONIVA11G06910.2 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3310 | 36 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 5e-57 | bZIP family protein |