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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | ONIVA10G07200.3 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family | CAMTA | ||||||||
| Protein Properties | Length: 1965aa MW: 222534 Da PI: 8.1699 | ||||||||
| Description | CAMTA family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | CG-1 | 93.1 | 2.5e-29 | 960 | 1033 | 42 | 117 |
CG-1 42 ynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
y+ +v ++DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqrr+y +Lee+ ++i+lvhyle
ONIVA10G07200.3 960 YKPMVVS--QNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI 1033
5555666..89**************************************************************986 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| CDD | cd14798 | 1.74E-8 | 15 | 132 | No hit | No description |
| SuperFamily | SSF52540 | 3.05E-53 | 170 | 440 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Pfam | PF00931 | 5.3E-50 | 186 | 466 | IPR002182 | NB-ARC |
| Gene3D | G3DSA:3.40.50.300 | 3.1E-19 | 191 | 340 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| PRINTS | PR00364 | 8.5E-12 | 204 | 219 | No hit | No description |
| PRINTS | PR00364 | 8.5E-12 | 276 | 290 | No hit | No description |
| PRINTS | PR00364 | 8.5E-12 | 373 | 387 | No hit | No description |
| Gene3D | G3DSA:3.80.10.10 | 4.8E-6 | 421 | 430 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| SuperFamily | SSF52058 | 4.25E-22 | 505 | 879 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| Gene3D | G3DSA:3.80.10.10 | 4.8E-6 | 574 | 709 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| Gene3D | G3DSA:3.80.10.10 | 2.7E-4 | 757 | 891 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| PROSITE profile | PS51437 | 38.064 | 928 | 1039 | IPR005559 | CG-1 DNA-binding domain |
| SMART | SM01076 | 9.7E-22 | 932 | 1034 | IPR005559 | CG-1 DNA-binding domain |
| Pfam | PF03859 | 4.4E-25 | 967 | 1032 | IPR005559 | CG-1 DNA-binding domain |
| Gene3D | G3DSA:1.25.40.20 | 1.7E-15 | 1300 | 1429 | IPR020683 | Ankyrin repeat-containing domain |
| PROSITE profile | PS50297 | 16.786 | 1300 | 1437 | IPR020683 | Ankyrin repeat-containing domain |
| CDD | cd00204 | 4.34E-10 | 1306 | 1425 | No hit | No description |
| SuperFamily | SSF48403 | 1.13E-14 | 1316 | 1427 | IPR020683 | Ankyrin repeat-containing domain |
| PROSITE profile | PS50088 | 8.656 | 1366 | 1398 | IPR002110 | Ankyrin repeat |
| Gene3D | G3DSA:3.80.10.10 | 2.7E-4 | 1431 | 1449 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| SuperFamily | SSF52540 | 1.09E-7 | 1509 | 1562 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| SMART | SM00015 | 0.67 | 1512 | 1534 | IPR000048 | IQ motif, EF-hand binding site |
| PROSITE profile | PS50096 | 7.547 | 1513 | 1542 | IPR000048 | IQ motif, EF-hand binding site |
| Pfam | PF00612 | 0.099 | 1515 | 1533 | IPR000048 | IQ motif, EF-hand binding site |
| SMART | SM00015 | 0.0021 | 1535 | 1557 | IPR000048 | IQ motif, EF-hand binding site |
| PROSITE profile | PS50096 | 9.615 | 1536 | 1560 | IPR000048 | IQ motif, EF-hand binding site |
| Pfam | PF00612 | 4.5E-4 | 1538 | 1557 | IPR000048 | IQ motif, EF-hand binding site |
| SuperFamily | SSF56112 | 1.5E-78 | 1649 | 1926 | IPR011009 | Protein kinase-like domain |
| Gene3D | G3DSA:3.30.200.20 | 3.4E-26 | 1654 | 1751 | No hit | No description |
| PROSITE profile | PS50011 | 42.393 | 1666 | 1936 | IPR000719 | Protein kinase domain |
| SMART | SM00220 | 1.2E-60 | 1666 | 1936 | IPR000719 | Protein kinase domain |
| Pfam | PF07714 | 3.8E-62 | 1668 | 1928 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| CDD | cd13999 | 1.47E-109 | 1672 | 1929 | No hit | No description |
| PROSITE pattern | PS00107 | 0 | 1672 | 1697 | IPR017441 | Protein kinase, ATP binding site |
| PRINTS | PR00109 | 6.3E-14 | 1748 | 1761 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| Gene3D | G3DSA:1.10.510.10 | 1.6E-47 | 1752 | 1930 | No hit | No description |
| PRINTS | PR00109 | 6.3E-14 | 1785 | 1803 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| PROSITE pattern | PS00108 | 0 | 1791 | 1803 | IPR008271 | Serine/threonine-protein kinase, active site |
| PRINTS | PR00109 | 6.3E-14 | 1856 | 1878 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| PRINTS | PR00109 | 6.3E-14 | 1900 | 1922 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006468 | Biological Process | protein phosphorylation | ||||
| GO:0005634 | Cellular Component | nucleus | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| GO:0004672 | Molecular Function | protein kinase activity | ||||
| GO:0005515 | Molecular Function | protein binding | ||||
| GO:0005524 | Molecular Function | ATP binding | ||||
| GO:0043531 | Molecular Function | ADP binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 1965 aa Download sequence Send to blast |
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ 300 AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ 360 QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ 420 VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF 480 DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR 540 RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL 600 DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH 660 LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER 720 NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI 780 AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE 840 AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH 900 PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RYQADTGGCY 960 KPMVVSQNDG HNWRKKKDEM TVKEDHERLK SGSIDVLECY YAHGEENENF QRRMYRMLEE 1020 DVKHIILVHY LEIKFSSATG DSSATENTFQ QNDGSLAAAI GYPILKTASD ILKDSFKEAD 1080 SFTRWMGKEL AEVDYSQIQS SCIEEADSTI EASSREPLDQ FNVAPMDLQD HLFSIVSILP 1140 RWTYAGSMTK LLVLSYIPNK SRRDSGGHAC LEKLKFQRRF QQMGLSNVIL PHINLAESLS 1200 MLPVPTACSG VREFEFRPTD SQYMDAPRPL GGTNKVYFRM RLDNLLSLGP DEYRAAITNQ 1260 SSTKMIDLSK KIISLLANND EWSKVLKLVD DNELFTDNRQ DQFAVHLIKR KLHIWLLHKV 1320 RAGGKELSVL DDEGLGVIHL AAALGFDWAI RATVAAGVNI NFRDVHGWTA LHWAAFCGRK 1380 RTVVALIALG AAPGALTDPH PNYPVESTPA DLASANGHRG ISGFLAESSL TSHLQSLNLK 1440 ETNMSEISGL TGIGDITARC ASQPAIGDSL GAVLNAARMY QIFSVQSFQR KQALQYEGLL 1500 SMKSSKPGQL DPLHVAASRI QNKYRGWKGR KEFLCIRQRI VKIQAHVRGH QVRKHYQKMI 1560 WPVGIWEKII LSGRPRPTGL RGFRPTEGTA KSSSHGTSSK GITDRPTGDD YDFLLEGRKQ 1620 TEERPQKALA RMKHMAQYPE ARDHYRGMMT AVPEMQDSQI IKNEDLEELR ELGSGTFGTV 1680 YHGKWKGSDV AIKRIKKSCF TGQSSELERL ANEFWREAEI LSKLHHPNVV AFYGVVKDGP 1740 GGTLATVTEF MVNGSLRHVL QRKDKYLDRR KRLIIAMDAA FGLEYLHSKN IVHFDLKCDN 1800 LLVNLKDQSR PICKVGDFGL SKIKRNTLVS GGVRGTLPWM APELLNGSSN KVSEKVDVFS 1860 FGIVMWEILT GEEPYANMHY GAIIGGIVNN TLRPPVPVSC DPEWRRLMEQ CWAPDPSQRP 1920 AFTEIAGRLR AISPNMITPQ RRPDLGLEEG PTWFVALGKK MRKRD |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 3ppz_A | 2e-54 | 1665 | 1945 | 38 | 309 | Serine/threonine-protein kinase CTR1 |
| 3ppz_B | 2e-54 | 1665 | 1945 | 38 | 309 | Serine/threonine-protein kinase CTR1 |
| Search in ModeBase | ||||||
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | AK100740 | 0.0 | AK100740.1 Oryza sativa Japonica Group cDNA clone:J023118D09, full insert sequence. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_015614492.1 | 0.0 | disease resistance protein RGA5-like | ||||
| TrEMBL | A0A0E0IR94 | 0.0 | A0A0E0IR94_ORYNI; Uncharacterized protein | ||||
| STRING | ONIVA10G07200.1 | 0.0 | (Oryza nivara) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G64220.2 | 1e-117 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | ||||
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