 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | ONIVA10G07200.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
| Family | CAMTA | ||||||||
| Protein Properties | Length: 2013aa MW: 228311 Da PI: 8.2377 | ||||||||
| Description | CAMTA family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | CG-1 | 154.1 | 3e-48 | 969 | 1081 | 5 | 117 |
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96
+rwl ++ei++iL+n++++ l++e++++p+sgsl++++rk++ryfr+DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqr
ONIVA10G07200.1 969 INRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQR 1060
68****************************************************************************************** PP
CG-1 97 rcywlLeeelekivlvhylev 117
r+y +Lee+ ++i+lvhyle
ONIVA10G07200.1 1061 RMYRMLEEDVKHIILVHYLEI 1081
******************986 PP
| |||||||
| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| CDD | cd14798 | 1.83E-8 | 15 | 132 | No hit | No description |
| SuperFamily | SSF52540 | 3.12E-53 | 170 | 440 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Pfam | PF00931 | 5.5E-50 | 186 | 466 | IPR002182 | NB-ARC |
| Gene3D | G3DSA:3.40.50.300 | 3.2E-19 | 191 | 340 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| PRINTS | PR00364 | 9.1E-12 | 204 | 219 | No hit | No description |
| PRINTS | PR00364 | 9.1E-12 | 276 | 290 | No hit | No description |
| PRINTS | PR00364 | 9.1E-12 | 373 | 387 | No hit | No description |
| Gene3D | G3DSA:3.80.10.10 | 4.1E-6 | 421 | 430 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| SuperFamily | SSF52058 | 5.89E-22 | 505 | 879 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| Gene3D | G3DSA:3.80.10.10 | 4.1E-6 | 574 | 695 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| Gene3D | G3DSA:3.80.10.10 | 5.4E-5 | 696 | 711 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| Gene3D | G3DSA:3.80.10.10 | 5.4E-5 | 761 | 859 | IPR032675 | Leucine-rich repeat domain, L domain-like |
| PROSITE profile | PS51437 | 68.149 | 961 | 1087 | IPR005559 | CG-1 DNA-binding domain |
| SMART | SM01076 | 2.4E-60 | 964 | 1082 | IPR005559 | CG-1 DNA-binding domain |
| Pfam | PF03859 | 6.7E-44 | 969 | 1080 | IPR005559 | CG-1 DNA-binding domain |
| PROSITE profile | PS50297 | 16.786 | 1348 | 1485 | IPR020683 | Ankyrin repeat-containing domain |
| Gene3D | G3DSA:1.25.40.20 | 1.7E-15 | 1348 | 1477 | IPR020683 | Ankyrin repeat-containing domain |
| CDD | cd00204 | 4.30E-10 | 1354 | 1473 | No hit | No description |
| SuperFamily | SSF48403 | 1.17E-14 | 1364 | 1475 | IPR020683 | Ankyrin repeat-containing domain |
| PROSITE profile | PS50088 | 8.656 | 1414 | 1446 | IPR002110 | Ankyrin repeat |
| SuperFamily | SSF52540 | 8.76E-8 | 1557 | 1610 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| SMART | SM00015 | 0.67 | 1560 | 1582 | IPR000048 | IQ motif, EF-hand binding site |
| PROSITE profile | PS50096 | 7.547 | 1561 | 1590 | IPR000048 | IQ motif, EF-hand binding site |
| Pfam | PF00612 | 0.1 | 1563 | 1581 | IPR000048 | IQ motif, EF-hand binding site |
| SMART | SM00015 | 0.0021 | 1583 | 1605 | IPR000048 | IQ motif, EF-hand binding site |
| PROSITE profile | PS50096 | 9.615 | 1584 | 1608 | IPR000048 | IQ motif, EF-hand binding site |
| Pfam | PF00612 | 4.6E-4 | 1586 | 1605 | IPR000048 | IQ motif, EF-hand binding site |
| SuperFamily | SSF56112 | 1.5E-78 | 1697 | 1974 | IPR011009 | Protein kinase-like domain |
| Gene3D | G3DSA:3.30.200.20 | 3.5E-26 | 1702 | 1799 | No hit | No description |
| SMART | SM00220 | 1.2E-60 | 1714 | 1984 | IPR000719 | Protein kinase domain |
| PROSITE profile | PS50011 | 42.393 | 1714 | 1984 | IPR000719 | Protein kinase domain |
| Pfam | PF07714 | 3.9E-62 | 1716 | 1976 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| PROSITE pattern | PS00107 | 0 | 1720 | 1745 | IPR017441 | Protein kinase, ATP binding site |
| CDD | cd13999 | 2.57E-109 | 1720 | 1977 | No hit | No description |
| PRINTS | PR00109 | 7.0E-14 | 1796 | 1809 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| Gene3D | G3DSA:1.10.510.10 | 1.7E-47 | 1800 | 1978 | No hit | No description |
| PRINTS | PR00109 | 7.0E-14 | 1833 | 1851 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| PROSITE pattern | PS00108 | 0 | 1839 | 1851 | IPR008271 | Serine/threonine-protein kinase, active site |
| PRINTS | PR00109 | 7.0E-14 | 1904 | 1926 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| PRINTS | PR00109 | 7.0E-14 | 1948 | 1970 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006468 | Biological Process | protein phosphorylation | ||||
| GO:0005634 | Cellular Component | nucleus | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| GO:0004672 | Molecular Function | protein kinase activity | ||||
| GO:0005515 | Molecular Function | protein binding | ||||
| GO:0005524 | Molecular Function | ATP binding | ||||
| GO:0043531 | Molecular Function | ADP binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 2013 aa Download sequence Send to blast |
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ 300 AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ 360 QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ 420 VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF 480 DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR 540 RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL 600 DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH 660 LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER 720 NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI 780 AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE 840 AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH 900 PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RISTSANFLD 960 IKQILEDAIN RWLCPSEICE ILKNYRSFFL ATEPPNKPPS GSLFVFDRKI LRYFRNDGHN 1020 WRKKKDEMTV KEDHERLKSG SIDVLECYYA HGEENENFQR RMYRMLEEDV KHIILVHYLE 1080 IKFSSATGDS SATENTFQQN DGSLAAAIGY PILKTASDIL KDSFKEADSF TRWMGKELAE 1140 VDYSQIQSSC IEEADSTIEA SSREPLDQFN VAPMDLQDHL FSIVSILPRW TYAGSMTKLL 1200 VLSYIPNKSR RDSGGHACLE KLKFQRRFQQ MGLSNVILPH INLAESLSML PVPTACSGVR 1260 EFEFRPTDSQ YMDAPRPLGG TNKVYFRMRL DNLLSLGPDE YRAAITNQSS TKMIDLSKKI 1320 ISLLANNDEW SKVLKLVDDN ELFTDNRQDQ FAVHLIKRKL HIWLLHKVRA GGKELSVLDD 1380 EGLGVIHLAA ALGFDWAIRA TVAAGVNINF RDVHGWTALH WAAFCGRKRT VVALIALGAA 1440 PGALTDPHPN YPVESTPADL ASANGHRGIS GFLAESSLTS HLQSLNLKET NMSEISGLTG 1500 IGDITARCAS QPAIGDSLGA VLNAARMYQI FSVQSFQRKQ ALQYEGLLSM KSSKPGQLDP 1560 LHVAASRIQN KYRGWKGRKE FLCIRQRIVK IQAHVRGHQV RKHYQKMIWP VGIWEKIILS 1620 GRPRPTGLRG FRPTEGTAKS SSHGTSSKGI TDRPTGDDYD FLLEGRKQTE ERPQKALARM 1680 KHMAQYPEAR DHYRGMMTAV PEMQDSQIIK NEDLEELREL GSGTFGTVYH GKWKGSDVAI 1740 KRIKKSCFTG QSSELERLAN EFWREAEILS KLHHPNVVAF YGVVKDGPGG TLATVTEFMV 1800 NGSLRHVLQR KDKYLDRRKR LIIAMDAAFG LEYLHSKNIV HFDLKCDNLL VNLKDQSRPI 1860 CKVGDFGLSK IKRNTLVSGG VRGTLPWMAP ELLNGSSNKV SEKVDVFSFG IVMWEILTGE 1920 EPYANMHYGA IIGGIVNNTL RPPVPVSCDP EWRRLMEQCW APDPSQRPAF TEIAGRLRAI 1980 SPNMITPQRR PDLGLEEGPT WFVALGKKMR KRD |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 3ppz_A | 2e-54 | 1713 | 1993 | 38 | 309 | Serine/threonine-protein kinase CTR1 |
| 3ppz_B | 2e-54 | 1713 | 1993 | 38 | 309 | Serine/threonine-protein kinase CTR1 |
| Search in ModeBase | ||||||
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | AK100740 | 0.0 | AK100740.1 Oryza sativa Japonica Group cDNA clone:J023118D09, full insert sequence. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A0E0IR92 | 0.0 | A0A0E0IR92_ORYNI; Uncharacterized protein | ||||
| STRING | ONIVA10G07200.1 | 0.0 | (Oryza nivara) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP8320 | 7 | 12 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G64220.2 | 1e-117 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|