PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G26490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | EIL | ||||||||
Protein Properties | Length: 592aa MW: 65007.8 Da PI: 5.2943 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 501.6 | 3.8e-153 | 80 | 468 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 eel++rmw+d++++krlke ++++ +++++a g +++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+ ONIVA07G26490.1 80 EELERRMWRDRVRHKRLKELQQSRAGRESRAgdagGGGRQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDN 173 8**********************99999988888888899****************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgel 184 Lr+WWkekv+fdrngpaai+kyqa+n++++ + + ++ + +hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww+e+ ONIVA07G26490.1 174 LRSWWKEKVRFDRNGPAAIAKYQADNAVPGCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAWWPEA 267 ********************************999888******************************************************** PP T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXX CS EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqspkvtl 276 g++k+ g+ppykkphdlkkawkv+vLtavikhmsp+++++r+l+rqsk+lqdkm+ake ++l+vl+qee+++ ++++ ++ ++ ++++ ONIVA07G26490.1 268 GVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGalPPP--LSAASFNA 359 ******************************************************************************965444..478899** PP XXXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.X CS EIN3 277 sceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgse 338 s + ++dveg + + + + +k+++ ++++++kr +p+ + s+ ++tc + q+++s+ ONIVA07G26490.1 360 SVSGEYDVEGVDGDEAGNNNLQKAQNdatafmdltttmdaalsnnkflimplmkeeaiDVDFIQKRS-EPELMLSSDSHARVYTCGNVQCPHSN 452 *********5555554555555555556899***********************************9.55555555666678************ PP XXXXXXXXXXXXXXXX CS EIN3 339 telifadknsisqney 354 ++l+f d+n+++ ++y ONIVA07G26490.1 453 YALGFLDRNERNAHQY 468 **************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 6.8E-129 | 80 | 337 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.1E-70 | 216 | 345 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.27E-58 | 217 | 340 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 592 aa Download sequence Send to blast |
MMGAAVTMVD RRMAFAAEAD VDSKAAFGFF GGECFVGEGD LVNPAPPPPQ QQQVHEGGFA 60 AEDESDGDDD DDDDDVDDIE ELERRMWRDR VRHKRLKELQ QSRAGRESRA GDAGGGGRQQ 120 RQSQEQARRK KMSRAQDGIL KYMLKMMEVC NAQGFVYGII PEKGKPVSGA SDNLRSWWKE 180 KVRFDRNGPA AIAKYQADNA VPGCDGDAGG AAPAGPHSLH ELQDTTLGSL LSALMQHCDP 240 PQRRFPLEKG VPPPWWPEGS EAWWPEAGVP KELGPPPYKK PHDLKKAWKV AVLTAVIKHM 300 SPDVDKVRRL VRQSKCLQDK MTAKEIVTWL AVLKQEEDLY LKLHPGALPP PLSAASFNAS 360 VSGEYDVEGV DGDEAGNNNL QKAQNDATAF MDLTTTMDAA LSNNKFLIMP LMKEEAIDVD 420 FIQKRSEPEL MLSSDSHARV YTCGNVQCPH SNYALGFLDR NERNAHQYAC KHNAAAAAAE 480 SKPPPPHIFE PLGSFDFDLP VDGQRCLAGL MTMYDNDVAA ATQMHHHHHQ QQQANFFIRD 540 DAPFGGDVAA TAAAASEFRF SSNFNVSGGG AVDYGGAMQQ PPAKYAGSNW FY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-70 | 214 | 345 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-70 | 214 | 345 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015646574.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q8W3L9 | 0.0 | EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2 | ||||
TrEMBL | A0A0E0I5U9 | 0.0 | A0A0E0I5U9_ORYNI; Uncharacterized protein | ||||
TrEMBL | B8B649 | 0.0 | B8B649_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA07G26490.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-138 | ETHYLENE-INSENSITIVE3-like 1 |
Publications ? help Back to Top | |||
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