PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G13650.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 209aa    MW: 21823.7 Da    PI: 9.8233
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G13650.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM392.5e-12111454127
              NAM   4 Gfr..FhPtdeelvveyLkkkvegkk..leleevikev.diykvePwdLpk.....kvkaeekewyfFskrdkkyat...gkrknratksgy.. 82 
                      Gfr  F P+d++l+++ L++k+++ +   +++  +++v d + + P +L +       +++ + wyfFs r ++ a+   ++ ++ra+  g   
  ONIVA07G13650.1  11 GFRipFLPSDSDLLDCLLRPKIASGRvdPRFAPLVHDVaDAFALPPAQLAAahapaPGAGGAEAWYFFSVRPRARARagsKRAASRAVGGGGgk 104
                      6665599****************9995433334599999**********843454422236779******999888521133445555533223 PP

              NAM  83 .WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       W + g +k+v        g  + + + + +a   +  +W+m ey 
  ONIVA07G13650.1 105 rWCSMGAKKAVEG-----GGYCQRFRYKERTAAGVVAPRWMMVEYG 145
                      5******999977.....57889999998888888999*******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.90310175IPR003441NAC domain
PfamPF023653.1E-912145IPR003441NAC domain
SuperFamilySSF1019415.36E-2315175IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MAPLADPAAE GFRIPFLPSD SDLLDCLLRP KIASGRVDPR FAPLVHDVAD AFALPPAQLA  60
AAHAPAPGAG GAEAWYFFSV RPRARARAGS KRAASRAVGG GGGKRWCSMG AKKAVEGGGY  120
CQRFRYKERT AAGVVAPRWM MVEYGVAQEH DGEGVAQEHG GEGVAELVLC KIFRSPEPSR  180
RSESGSPSSS SSASASPSCS GGRKRKAAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658578.12e-55PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A0E0I1381e-145A0A0E0I138_ORYNI; Uncharacterized protein
TrEMBLA2YLJ01e-145A2YLJ0_ORYSI; Uncharacterized protein
STRINGONIVA07G13650.11e-146(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153951017