PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G11010.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 732aa    MW: 77424 Da    PI: 3.7564
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G11010.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.82.6e-20894186
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkat 86
                     lppG+rF+P d+elv++yL +++++++++l+ vi+e+d + + Pw L + +  + +e +fF++++ k+ +gkr++r +   g+W+ +
  ONIVA07G11010.1  8 LPPGVRFDPADDELVSRYLLRRLRKQPIPLHGVIHEADPLGAPPWMLLADHGRGGDEAFFFAEARAKNVRGKRQKRtVEGGGFWQGQ 94
                     79****************************99***************877777889********************555589**965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.45E-21492IPR003441NAC domain
PROSITE profilePS5100521.1278169IPR003441NAC domain
PfamPF023652.1E-9994IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 732 aa     Download sequence    Send to blast
MAAAADGLPP GVRFDPADDE LVSRYLLRRL RKQPIPLHGV IHEADPLGAP PWMLLADHGR  60
GGDEAFFFAE ARAKNVRGKR QKRTVEGGGF WQGQRVCIDG ERLRVPGDGG GGEVGGELEI  120
EWRNGHGKKR KREPERLGAR VHDDDVDGGE RAAPRRAVEE TALFVQQSSA VDCAESADQS  180
FSGVIEPVFR DLPDMMPEQA DAGDTAETTA AVVNLTDAMT EQPVLPLAAD GDDQSSYGVI  240
DPAFRDLADL MVLPPVLAQQ EPPLAPVAMV DLPPGNADCA DHQSCSGVID PAFRDLPDMT  300
VLPPVQADTG GGAETTTAMV SLTDKLKYSS SMDGEAAPAW CDFDFPESTD ELLSYINFTA  360
GAHDNNDGSV GRAAPWRPVS EIAMFEQPSA VDLPPGDADC TESADQSFSG VIEPVFHDLP  420
DMIREQADAG DTAETTAAVV NQNYSMALCD FDSGIDFTAG AHDSGMERAT PWTPMSEAAL  480
FEQQGPPLAP AAVVDLPPGN DDCADHQSSY GDMIVLPSEQ AGAGGGPETT EALLDQPVPP  540
LAADCANQGS YGVIDPVFCD LADLIVLPPE QADAMDGEAA PAWCDFDFPE NIDEALSYVD  600
FTAGAHADND GGVSETAMFE QLGSPPQHDP LLMDADGADQ SSSGALIDTV FGDHAEPIVL  660
PLEQADTGGG AAAAVNLMDK QKYSSSMDGE EAPAWCDSDF PESIDEVLSY VDFSTDGASC  720
DFSMDELFDL AD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646406.10.0uncharacterized protein LOC4343147
TrEMBLA0A0E0I0330.0A0A0E0I033_ORYNI; Uncharacterized protein
STRINGONIVA07G11010.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15243914
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.25e-11NAC domain containing protein 41