PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G06070.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 359aa    MW: 38409.2 Da    PI: 6.1503
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G06070.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN343.38.5e-14106197152232
                      S.SSSSS-..TTS--TTT--...HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSS CS
             EIN3 152 m.qhcdpp..qrrfplekgv...epPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirelerqsk 232
                      m q c+pp   rr     ++   +pPWWPt +e wwg+  +++ +g       p+  p+ l ka kv+vL av++h++p++ ++   + +s+
  ONIVA07G06070.1 106 MaQECTPPlvARRDRKSGATpppPPPWWPTAEEPWWGTEVAAHLHGrrmatRVPFASPRRLAKAEKVAVLVAVVRHVAPDFGRLAAAAGRSR 197
                      44888888553554555555111578***********8877666667898778****************************99887776664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.109.3E-3585223IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-4088218IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.7E-1489198No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MASSSSGKRV SSSSTSSHQQ HTKRRRRAPG DELSQTHGVA RNAVAAMPMV GVAPLMLSPV  60
TMQAQLLCYV AMPMAPVAGG GGGGVPLAAA LCRLRNGTLE RMVREMAQEC TPPLVARRDR  120
KSGATPPPPP PWWPTAEEPW WGTEVAAHLH GRRMATRVPF ASPRRLAKAE KVAVLVAVVR  180
HVAPDFGRLA AAAGRSRLTE LESSIWESAL RGERERRYVV MPSFILLPPP PPPPPQHAHS  240
AESAAAHAGP EPESADQTAV DFSVSGEDTV TTGPELEQLV GDGNGATVEG EGQKTEDSPV  300
PPLLEQHGGE DHDHHRQHGG FSGEVSGAAP EDVDWFDYDE VLRGLDELEI PSFFGGYYI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-129021311128ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037400.0AP003740.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1118_B03.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645905.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A0E0HY800.0A0A0E0HY80_ORYNI; Uncharacterized protein
STRINGONIVA07G06070.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1804988