 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ONIVA06G22870.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GATA |
| Protein Properties |
Length: 387aa MW: 40756.4 Da PI: 9.6834 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA06G22870.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 54.5 | 1.5e-17 | 200 | 233 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
ONIVA06G22870.1 200 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 233
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010255 | Biological Process | glucose mediated signaling pathway |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MSTIYMSQLS AALPLMEGEH HQDHHQGHFQ AFSLQPKDPP VLFPFVINRR SSSSSPSDST 60
TLSYGSDHHL TQQQQHQHQA MLEPQHMIGG SSAGIFATPF PTVKSIRDDM IERSQFDPYD 120
TEKLQASCGL AKVVAGGKWS AVPAAKMKIT RKMGEPSSGV TGGAATTVAP KKPRRRLAQA 180
YEDHGHGGAM GQAFGVIRVC SDCNTTKTPL WRSGPCGPKS LCNACGIRQR KARRAMMASG 240
LPASPNAAGP KAAAHSGAAA VAAAQPKVKK EKRADVDRSS LPFKKRCKAV QVEDHQTLPA 300
ATNAAAAAAM EETAESATVA PPPAPTTRGC TLVDSIGLSW SKTHAAATAS CSFRPSPVAP 360
GFAAAVQDEI TDAAMLLMTL SCGLVRS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 169 | 176 | PKKPRRRL |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK069851 | 0.0 | AK069851.1 Oryza sativa Japonica Group cDNA clone:J023034D16, full insert sequence. |
