PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G21710.2

Organism

Oryza nivara

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 333aa MW: 35386.8 Da PI: 6.9849

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G21710.2	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.9	6.1e-15	263	306	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ ONIVA05G21710.2 263 RRQKRMIKNRESAARSRARKQAYTNELENKVLRLEEENERLKKQ 306 79***************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-14	257	306	No hit	No description
SMART	SM00338	6.9E-10	259	315	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.553	261	306	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.01E-24	263	317	No hit	No description
SuperFamily	SSF57959	1.13E-10	263	308	No hit	No description
Pfam	PF00170	1.4E-12	263	306	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	266	281	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MIQAMASHAG GSGGGGGGSG RDAGSAQRGS MQGLARQGSL YGLTLNEVQS QLGEPLLSMN 60 LDELLKSVFP DGVDLDGGGG GIAGQSQPAL GLQRQGSITM PPELSKKTVD EVWKGIQDVP 120 KRGAEEGGRR RRERQPTLGE MTLEDFLVKA GVVTDPNDLP GNMDVVGGAA AAAAGTSDLN 180 AGAQWLQQYH QQALEPQHPS IGAPYMATHL APQPLAVATG AVLDPIYSDG QITSPMLGAL 240 SDPQTPGRKR GATGEIADKL VERRQKRMIK NRESAARSRA RKQAYTNELE NKVLRLEEEN 300 ERLKKQKELD EILNAAPPPE PKYQLRRTSS AAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	134	GRRRRERQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK063398	0.0	AK063398.1 Oryza sativa Japonica Group cDNA clone:001-114-H11, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015638733.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	1e-85	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0E0HG57	0.0	A0A0E0HG57_ORYNI; Uncharacterized protein
STRING	ONIVA05G21710.2	0.0	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	5e-64	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]