PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G15600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 474aa MW: 50715.1 Da PI: 8.8321 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 5.9e-11 | 271 | 329 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l++l+ l+se+ ONIVA04G15600.1 271 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLSMLQRDTTGLTSEN 329 9***********************************************99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-18 | 267 | 331 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.139 | 269 | 332 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.08E-11 | 271 | 326 | No hit | No description |
Pfam | PF00170 | 2.2E-9 | 271 | 329 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-11 | 271 | 326 | No hit | No description |
CDD | cd14703 | 8.75E-24 | 272 | 321 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence Send to blast |
MAESRIFGGL KPTKSRLLGP TIRGPPPNGA ATHAPRRILF SFSFSPESQW LGQSSTRACL 60 PPLRSPCLPA PSAASPAYPR LASSAASASA PARLRSRITL PGGRSPVPPM DPAASAAESS 120 SLSSRDVAAM PDSPPRRAAR HRRAQSEILL GAALPDDIAF DADLGVVGEV GGGGGDDYEE 180 EEDDEEEEME GAGGSRMFEM FLEAGGKLET PEPAAPLPPP LARPRHQHSM SMDGSTSLAS 240 SAAGVAGRMG ADAKKAISDA KLAELALVDP KRAKRILANR QSAARSKERK MRYIAELERK 300 VQTLQTEATT LSAQLSMLQR DTTGLTSENS DLKIRVQTME QQVRLQDALN DRLRDEIQQL 360 KVATGQVNAN CGKVGNFGLS SFGGANPQGY QRSHIQSLLA AQQLQQLQIH SQHQQQQMHL 420 QQHHHLSTVQ QQLLQEGLPL PGDLKMKGIV AASHAQNAGA SESHALRSEP NRMI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CR855196 | 0.0 | CR855196.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159F11, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015633411.1 | 0.0 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 6e-84 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A0E0H2N0 | 0.0 | A0A0E0H2N0_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA04G15600.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 4e-65 | bZIP family protein |
Publications ? help Back to Top | |||
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