PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G16560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 188aa MW: 20815.6 Da PI: 11.2516 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.9 | 2.6e-14 | 81 | 122 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r +r++kNRe+A rsR+RK+a++ eLe+k+ Le+eNk+L+ ONIVA03G16560.1 81 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENKRLR 122 6899*************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.1E-11 | 77 | 139 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.22 | 79 | 122 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.73E-17 | 81 | 122 | No hit | No description |
Pfam | PF00170 | 9.7E-12 | 81 | 122 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.88E-10 | 81 | 123 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-14 | 81 | 123 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MTLEDFLSRA GADSGSGGGG GADGARWARA HHHHVGRPVP RPLGLGAGPV LDALYHDGPV 60 SGSKRAPAAG EGAAAEKTVE RRKKRMIKNR ESAARSRARK QAYTNELENK ISRLEEENKR 120 LRMHKAPEPV VQYVPQQEPK NQLRRTQDLG RKPLADRKAA LTGDPISRRR NPQHSLAHDI 180 LLRWCDIR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC118674 | 1e-169 | AC118674.3 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence. | |||
GenBank | AP014959 | 1e-169 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015632165.1 | 1e-100 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 6e-28 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A0E0GLQ9 | 1e-133 | A0A0E0GLQ9_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA03G16560.1 | 1e-134 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 9e-26 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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