PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G07280.2
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 249aa    MW: 26130.3 Da    PI: 10.2093
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G07280.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.41.3e-071481902163
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      R RKk+++ e ++ v +L  eN++L++e+ +l+  +a+l +e+
  ONIVA02G07280.2 148 RPRKKMRLPEVQQLVRSLAVENDSLREEMRTLQRACAALSKEN 190
                      89*************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.1E-4148186No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MDCAGDDDAV AAGIICSLRG ADLAGWTPPW WCSSSSKGAA REELIWPPVT RGKRSRRRSP  60
SAVAAAAGKK GRWARASPAS PLDYSGGSGS GSGSGSGSAA STSGGEDGAF CSPPGHRPAP  120
ATTKVSAMGR QQQLPFSAPS PLRPAGQRPR KKMRLPEVQQ LVRSLAVEND SLREEMRTLQ  180
RACAALSKEN DKLEIRLQIS SSRNKPMITE DLKGKQQIDQ QSATQSIGGS FALPDLNIPV  240
QDAADGSVH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147153RPRKKMR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1076300.0AK107630.1 Oryza sativa Japonica Group cDNA clone:002-131-E03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015626239.11e-177uncharacterized protein LOC4328519 isoform X1
TrEMBLA0A0E0G2M01e-177A0A0E0G2M0_ORYNI; Uncharacterized protein
STRINGONIVA02G07280.21e-178(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37902951