PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G03010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 467aa MW: 51902.9 Da PI: 5.6557 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.3 | 7.3e-33 | 265 | 319 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtpeLHerFv+av++L G+ekAtPk +l+lmkv+gLt++h+kSHLQkYRl ONIVA02G03010.1 265 KPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKSHLQKYRL 319 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.818 | 262 | 322 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.97E-17 | 263 | 319 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.8E-31 | 264 | 320 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.3E-25 | 265 | 320 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.0E-9 | 267 | 318 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 6.3E-22 | 353 | 399 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence Send to blast |
MSTQSVIAVK QFSGPDKIAQ AYTVPQPSAH VLSNANYDYD LCGSTNSTSL SCAIQSSNIK 60 TESISSSSLP KILPFSTDSN GESSLSRMSQ AEFSDPILSS SSTFCTSLYT SSPMNSGSCR 120 KTGYLPFLPQ PPKCEQQQNS VGQSSSSLML LDADLRNSGH ADDEHTDDLK DFLNLSSDCS 180 FHGKCSAMAY NEQMEFQFLS EQLGIAISNN EESPRLDDIY DRPPQLMSLP VSSCSDQEDL 240 QDARSPAKVQ LSSSRSSSGT ASCNKPRLRW TPELHERFVD AVNKLEGPEK ATPKGVLKLM 300 KVEGLTIYHI KSHLQKYRLA KYLPETKEDK KQEEKKTKSV ANGNDHAKKK SAQMAEALRM 360 QMEVQKQLHE QLEVQRQLQL RIEEHARYLQ KILEEQQKAR ESISSMTSTT EGESPEFAPM 420 EKTEDKAETS SAPLSKCRIT DTDAECHSKV DNKKTKPQAD LEMVHDE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-26 | 265 | 322 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q6YXZ4}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00354 | DAP | Transfer from AT3G13040 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK065704 | 0.0 | AK065704.1 Oryza sativa Japonica Group cDNA clone:J013037C19, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015627390.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Refseq | XP_015627391.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Swissprot | A2X0Q0 | 0.0 | PHR3_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 3 | ||||
TrEMBL | A0A0E0G0W8 | 0.0 | A0A0E0G0W8_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA02G03010.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4526 | 37 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13040.2 | 2e-65 | G2-like family protein |