PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI09G10130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 376aa MW: 39989.3 Da PI: 9.4665 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.9 | 1e-13 | 297 | 347 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ Nk+L + e+ ++ OMERI09G10130.1 297 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEMNKELERKQAEIMEM 347 79************************************9998777766665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.5E-11 | 293 | 358 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 295 | 346 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-10 | 297 | 345 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-13 | 297 | 346 | No hit | No description |
CDD | cd14707 | 1.69E-23 | 297 | 349 | No hit | No description |
Pfam | PF00170 | 1.4E-11 | 297 | 348 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 300 | 315 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MLTDRWGGRR EAMEFGNGGS SSSERRAPAE GATLARQGSV YSLTFDEFQS ALAGGGGGGG 60 GGSGFGKDFG SMNMDELLRS IWTAEESQAM ASASGSAAGV GVAVGAPPTS LQRQGSLTLP 120 RTLSAKTVDE VWRNLVRDEP PPVGAADGGE MPPQRQSTLG EMTLEEFLVR AGVVRENPPA 180 APPPVPPPMP PRPVPVVPKT TAFLGNFPGA NDAGTAALGF APLGMGDPAL GNGLMPRAVP 240 VGLPGAAVAM QAAVNQFDSG DKGNSDLSSP TEPMPYSFEG LVRGRRNGGG VEKVVERRQR 300 RMIKNRESAA RSRARKQAYT MELEAEVQKL KEMNKELERK QAEIMEMQKN EVEEMIKDPF 360 GRRKRLCLRR TLTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK065873 | 0.0 | AK065873.1 Oryza sativa Japonica Group cDNA clone:J013049N23, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015612550.1 | 0.0 | bZIP transcription factor TRAB1-like | ||||
Swissprot | Q6ZDF3 | 1e-119 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | A0A0E0ESY3 | 0.0 | A0A0E0ESY3_9ORYZ; Uncharacterized protein | ||||
STRING | ORGLA09G0097200.1 | 0.0 | (Oryza glaberrima) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.2 | 4e-33 | ABRE binding factor 4 |
Publications ? help Back to Top | |||
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