PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI08G17690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 83aa MW: 9301.46 Da PI: 10.9357 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 35 | 72 | 5 | 42 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 +r rr++kNRe+A rsR+RK+a+++eLe++v L a+ OMERI08G17690.1 35 RRKRRAMKNRESAERSRARKQAYLQELEQEVRLLRAKK 72 799*******************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 9.841 | 33 | 74 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-8 | 35 | 71 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.21E-8 | 35 | 73 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-9 | 35 | 72 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 38 | 53 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence Send to blast |
MERAAGTGSG GDDEELLLYR AEEQQQLGGG GGAERRKRRA MKNRESAERS RARKQAYLQE 60 LEQEVRLLRA KKRRPAPPVP PGT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012616 | 1e-88 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649649.1 | 1e-24 | protein ABSCISIC ACID-INSENSITIVE 5 | ||||
TrEMBL | A0A0E0ENR0 | 5e-49 | A0A0E0ENR0_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI08G17480.1 | 8e-50 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 |