PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI08G17680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 141aa MW: 15165.9 Da PI: 9.765 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51.5 | 2.1e-16 | 68 | 123 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r rr++kNRe+A rsR+RK+a+++eLe++v L aeN aL+ + +lk +a+ + OMERI08G17680.1 68 RRKRRAMKNRESAERSRARKQAYLQELEQEVRLLRAENAALRHQCHQLKAAAAEAE 123 799**********************************************9988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.6E-11 | 64 | 128 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.645 | 66 | 116 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.44E-11 | 68 | 117 | No hit | No description |
Pfam | PF00170 | 1.1E-13 | 68 | 118 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.6E-13 | 68 | 121 | No hit | No description |
CDD | cd14707 | 7.66E-15 | 68 | 115 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 71 | 86 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MERAAGSGGD AEELVLPPAS FQDGLPSSRS CIGGGAAAAA SALERELLYR AELHQQQQQL 60 GGGGGAERRK RRAMKNRESA ERSRARKQAY LQELEQEVRL LRAENAALRH QCHQLKAAAA 120 EAEAEAAAKK PTIQRTSSAT F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT836023 | 1e-148 | CT836023.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN045B18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649649.1 | 2e-54 | protein ABSCISIC ACID-INSENSITIVE 5 | ||||
TrEMBL | A0A0E0ENQ9 | 2e-92 | A0A0E0ENQ9_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI08G17470.1 | 3e-93 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 9e-08 | bZIP family protein |