PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI08G04650.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 442aa    MW: 48511.9 Da    PI: 7.0475
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI08G04650.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.74e-11132164234
                      XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                      +++k +rr+++NReAAr+sR+RKka+i++Le+ 
  OMERI08G04650.1 132 PRDKIQRRLAQNREAARKSRLRKKAYIQNLETS 164
                      57999*************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-5131194IPR004827Basic-leucine zipper domain
PfamPF001705.9E-8133168IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531133175IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.94E-7135179No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-8136181No hitNo description
PROSITE patternPS000360138153IPR004827Basic-leucine zipper domain
PfamPF141443.2E-27220295IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MELYPGYLED HFNIHKLSAP RYMTSAAPAA AQFAAPAPAA MGIYDRRHQH QHHPLAAGVW  60
GDHPFIRPDT TASTSNAAAA ALPAAMAVAP PPLTEPKFES QLALPLQHGD DQDDAALQEH  120
ASDSFEQEAS KPRDKIQRRL AQNREAARKS RLRKKAYIQN LETSRMKLAH LEQEITRARQ  180
QGAYINRSSN PATLPAPIDS GVVTFEVEYA QWVEEQGRQT AELRAALQAP AAEGPELRAA  240
VEAALAHYDR LFAAKREAAR RDVFFVMSGV WRTGAERFFL WIAGFRPSEV IRVLAPQLEP  300
MTERQAADVR GLQQKARHLE DALSQGMDKL KQTLADSLLA EAVVVSTSCA ASPPPPPEEE  360
PSSSAAGDGG CYMAQMGSAM GRLSNLVAFV DHADHLRQET LQNMYKILTL PQAARGLLAL  420
GDYCQRLRAL SSLWAARPRE PA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8315140.0CT831514.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129B22, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015650459.10.0transcription factor TGAL10-like isoform X2
RefseqXP_025883354.10.0transcription factor TGAL10-like isoform X1
SwissprotQ6ZBS80.0TGL10_ORYSJ; Transcription factor TGAL10
TrEMBLA0A0E0EIK50.0A0A0E0EIK5_9ORYZ; Uncharacterized protein
STRINGOMERI08G04690.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-108TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]