PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI07G23410.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 273aa    MW: 29268.9 Da    PI: 9.4298
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI07G23410.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.8e-15182224547
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                      +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  OMERI07G23410.1 182 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 224
                      79***************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-14175224No hitNo description
SMARTSM003381.0E-14178247IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335180224IPR004827Basic-leucine zipper domain
PfamPF001703.2E-12182224IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-11182225No hitNo description
CDDcd147072.31E-21182223No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MGVHAMSCHG GGGGGGEGAL SRQGSVYSLT LNEVENHLGE PLRSMNLDDL LRTVLPAAAA  60
AAETAGRKTV DEVWRDIQGA STGRHHATPM GEMTLEDFLS RAGVAVDGAA AAAGAHWLRG  120
HYPPPPPTTT TLQYVGGSGA VVDGVYNRVD GHGVAGFLSQ VGGAGRKRGG GADGVVEKTV  180
ERRQKRMIKN RESAARSRAR KQAYTNELEN KISRLEEENQ RLREHKAVAD FSTFPSCVDF  240
LKAFLTQKLE PVMQIVPQQE PKQQLRRTTS ASF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1109150.0AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645810.11e-175ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0E0EGC30.0A0A0E0EGC3_9ORYZ; Uncharacterized protein
STRINGOMERI07G23900.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.32e-44bZIP family protein