PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI07G11790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 205aa MW: 21357.2 Da PI: 9.5855 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.2 | 2.1e-12 | 11 | 141 | 4 | 127 |
NAM 4 Gfr..FhPtdeelvveyLkkkvegkk..leleevikev.diykvePwdLpk.....kvkaeekewyfFskrdkkyatgkr.knratksgy.Wka 85 Gfr F P+d++l+++ L++k+++ + +++ +++v d + + P +L + +a+ + wyfFs r ++ a +kr + ra+ g W + OMERI07G11790.1 11 GFRipFLPSDSDLLDCLLRPKIASGRvdPRFAPLVHDVaDAFALPPAQLAAthapaPGAAGAEAWYFFSARPRARAGSKRaAARAVGGGKrWCS 104 6655599****************9995433334599999**********843455422337789********9999766515678887756*** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 g +k+v g + + + + +a + +W++ ey OMERI07G11790.1 105 VGAKKAVEG-----GGYCQRFRYKERTAAGVVAPRWMLVEYG 141 ***999977.....5778889999888888889999999996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.353 | 10 | 171 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-8 | 13 | 141 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.53E-22 | 15 | 171 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MAPLADPAIE GFRIPFLPSD SDLLDCLLRP KIASGRVDPR FAPLVHDVAD AFALPPAQLA 60 ATHAPAPGAA GAEAWYFFSA RPRARAGSKR AAARAVGGGK RWCSVGAKKA VEGGGYCQRF 120 RYKERTAAGV VAPRWMLVEY GVAQEHGGEG VAQEHGGEGV AELVLCKIFR SPEPSPRSES 180 GSPSSSSSAS ASPSCSGGRK RKAAE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006658578.1 | 1e-52 | PREDICTED: NAC domain-containing protein 72-like | ||||
TrEMBL | A0A0E0EBH4 | 1e-142 | A0A0E0EBH4_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI07G11860.1 | 1e-143 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15395 | 10 | 17 |