PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI07G01350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 166aa MW: 17865 Da PI: 12.4795 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.3 | 3.7e-09 | 14 | 57 | 4 | 47 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r rrk++NRe+Arrs RK+ ++eL+ +++ L N++L+ OMERI07G01350.1 14 ERRLRRKISNRESARRSGTRKQRHLDELRARADRLRRCNRELAA 57 5899***********************************99975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-6 | 6 | 57 | No hit | No description |
SMART | SM00338 | 1.3E-4 | 11 | 74 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.117 | 13 | 58 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.58E-6 | 15 | 58 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MTTQPPEREA SADERRLRRK ISNRESARRS GTRKQRHLDE LRARADRLRR CNRELAARGH 60 AARGRAGLAG GGRRGLGWRA PRPRLAGAEE RPEAGAEASA GGRRGLGWRA RRRGRLRATR 120 SGSSAAGRSV ARAISASAVG CSGELHLCRR PSSACASSSA VDRPSA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC079830 | 3e-91 | AC079830.9 Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence. | |||
GenBank | AP014959 | 3e-91 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0E7A0 | 1e-103 | A0A0E0E7A0_9ORYZ; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27211 | 4 | 5 |