PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMERI06G22690.5

Organism

Oryza meridionalis

Taxonomic ID

40149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 267aa MW: 27640 Da PI: 9.0644

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMERI06G22690.5	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.7	4.4e-07	166	208	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L+ eN+ L++e+ l+ + +l +e+ OMERI06G22690.5 166 RPRKKMRLPEIQQLVRSLTVENDGLREEMVALQRACTALSKEN 208 89***********************************999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-4	166	205	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MTAANAEACA VAAAADIICS LRGADLAGWT PPWGTAAAKG KEVVVEGEME EEELAWPTVA 60 RGKRSRSSRR RSPSGSGSAA TKGRWARGSP ASPLDYSGGS GSGSAASTSG GEDGAFCSPP 120 PPPPVVTAAA ATTPTAAPTP SPAKVGPAGR RQLILPTPTP RPAGQRPRKK MRLPEIQQLV 180 RSLTVENDGL REEMVALQRA CTALSKENCK LETRLEKSSK RNGTKSEGQQ ARPQPDEPAA 240 KQESQNGFVL PDLNLPVEDM AADGSAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	171	RPRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012614	0.0	CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015644355.1	1e-111	uncharacterized protein LOC4341662
TrEMBL	A0A0E0E4D5	0.0	A0A0E0E4D5_9ORYZ; Uncharacterized protein
STRING	ONIVA06G26680.1	1e-112	(Oryza nivara)