PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI06G21830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 162aa MW: 17012.8 Da PI: 10.6812 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.5 | 2.4e-12 | 62 | 122 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + ++err+++NRe+ArrsR R++ +++eL v+eL a N++L+ el++ a++ e+ OMERI06G21830.1 62 DERKERRLASNRESARRSRVRRRRQLDELSSHVAELRAANHRLAVELNRAAARHAQMAREN 122 6689********************************************9998888887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-8 | 60 | 110 | No hit | No description |
SMART | SM00338 | 3.5E-7 | 60 | 124 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.622 | 62 | 125 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-9 | 63 | 122 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.34E-7 | 64 | 112 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 67 | 82 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MAYQSFGAVD LAASFFFSSS SSSPQPGLVG VHGDRFLAAA GGGGGDGGGD GGAASGKGTR 60 RDERKERRLA SNRESARRSR VRRRRQLDEL SSHVAELRAA NHRLAVELNR AAARHAQMAR 120 ENARLAEEAR ALRERLLRGG GGEAEEEAGG GCGAEAILAP MD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0E406 | 1e-105 | A0A0E0E406_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI06G20250.1 | 1e-106 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP20480 | 8 | 8 |