PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI03G27480.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 512aa MW: 55781.6 Da PI: 9.1507 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.4e-11 | 182 | 208 | 7 | 33 |
HHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLee 33 rr+++NReAAr+sR+RKka+i++Le OMERI03G27480.6 182 MRRLAQNREAARKSRLRKKAYIQQLES 208 69***********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-7 | 174 | 222 | No hit | No description |
SMART | SM00338 | 1.8E-5 | 175 | 251 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.128 | 178 | 222 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.0E-6 | 180 | 216 | No hit | No description |
Pfam | PF00170 | 1.4E-7 | 181 | 209 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 183 | 198 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.5E-29 | 260 | 334 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence Send to blast |
MGEARRGQNP HHVLGYGFHG TTLPNSMTSA NLFEQGGGGG GGADYFGELE EALVHQVATL 60 RRRAQQTATT TTSHHGHTTP FSTAAAAATA TARPPATLDI FPSWPMRSSL PTPKDGCSNV 120 TADTTDSESS SKNNGDQGAA AADMASQFDQ IPQQQQKQHK KMAASSTHSD HRMTKTLDPK 180 IMRRLAQNRE AARKSRLRKK AYIQQLESSK LRLAQMEQDL ERARSQGLLL GGSPGGNTSA 240 GAAMFDAEYG RWLEDGGRRM AELHGGLHAH LPDGDLRAIV DDALAHYDEL FRLRAAAAKA 300 DVFHLITGTW ATPAERCFLW MAGFRPSDLL KTVAPRLDPL TEQQVVGICS LQQSSQQAEE 360 ALSQGLEQLH QSLAETVANG GSVVDEASLG SFMGYMALAL GKLSNLEGFV IQADNLRQQT 420 LHQMHRILTI RQAARCFLAI GEYHNRLRAL SSLWASHPRE SQLTKFKYLT VEALGAGDAA 480 TGQRWTGTPL EEALTRGMGD GRRRRRQGQR RC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK101620 | 0.0 | AK101620.1 Oryza sativa Japonica Group cDNA clone:J033052J02, full insert sequence. | |||
GenBank | FJ750929 | 0.0 | FJ750929.1 Oryza sativa clone KCS115G01 DNA-binding protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015619722.1 | 0.0 | transcription factor TGAL11 | ||||
Swissprot | Q2QXL0 | 0.0 | TGL11_ORYSJ; Transcription factor TGAL11 | ||||
TrEMBL | A0A0E0D596 | 0.0 | A0A0E0D596_9ORYZ; Uncharacterized protein | ||||
STRING | OPUNC12G03020.1 | 0.0 | (Oryza punctata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-124 | bZIP family protein |
Publications ? help Back to Top | |||
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