PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI03G22530.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 617aa    MW: 66501.6 Da    PI: 4.0119
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI03G22530.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.64e-2671451128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 
                      lppG+rF+P+d+elv++yL +++++k+l+l+ vi ++d ++v Pw+L +  +++ +e +fF+ ++ k+ +gkr++r +   g+W+ +    d e
  OMERI03G22530.1   7 LPPGLRFDPSDHELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTLLAD-HTRGDEAFFFAGARAKNGKGKRQKRtVEGGGFWQGQRMavDGE 99 
                      79****************************999**************743.456789*******************555599**9665522222 PP

              NAM  92 vlsk..........kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                                    +        ++ k +L f+ ++ ++g ++ Wvmhey++
  OMERI03G22530.1 100 R--LvvpgdgggggD--GggleiTWRKYVLSFF-AEGERG-SSGWVMHEYAV 145
                      2..133456665550..055555899999****.444454.89*******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.03E-324164IPR003441NAC domain
PROSITE profilePS5100529.2117164IPR003441NAC domain
PfamPF023651.1E-158144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    Send to blast
MAGADGLPPG LRFDPSDHEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTLLADHTRG  60
DEAFFFAGAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LVVPGDGGGG GDGGGLEITW  120
RKYVLSFFAE GERGSSGWVM HEYAVTSPAD LASSPLRLYR VRFSGHGKKR KREPQCLDSH  180
DDEDGGVDQE RAAPRRAVAE TALFEGYGPL PAADATDQGS YGVIDGESSL LFHSLPGQSQ  240
IVLPADHDIN LYSSAESLFH AIHGAETQTA PLNEECCPPP LIVPLLQDKN STSDVMGDPS  300
LLLPERIDDD ELHCPLRESD MPDLPVSQTE GTEQKKLMPL LVSHCLPDLI VPRAEEADAT  360
AGAENPLLDE ERWSPPLPAS PTAALVKQNS YDLMAISSLL FSDLPDRIDD DDLSVSQTEG  420
TELSEQDSSG VIGDDYWRVF HGLSDLIALP AEEADATGGA EREEIALLDE ERRPPPQPAP  480
PTAALVPPLQ GQNSYDVMAD SSLLFADLPG RIDDDELQRS LRASDMPDQF LAQTEEPGAG  540
GGGGAAAALN KQSNSSPLGV EVPMALSDLE SPESMPLSDL EFPESIDEVL SYIDFTTDDT  600
SCLDFDMDEL FSDMPAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1355020.0AC135502.4 Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBankJN9823140.0JN982314.1 Oryza sativa Japonica Group NAC transcription factor 69 (NAC69) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015630217.11e-154NAC domain-containing protein 82
TrEMBLA0A0E0D3C60.0A0A0E0D3C6_9ORYZ; Uncharacterized protein
STRINGOMERI03G22020.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.21e-13NAC domain containing protein 41