PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI03G13930.4
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 889aa    MW: 99670 Da    PI: 5.9822
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI03G13930.4genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.1e-104878434
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34
                      k+ rr+++NReAAr+sR+RKka++++Le  
  OMERI03G13930.4 48 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 78
                     5899************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-745108IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8754791IPR004827Basic-leucine zipper domain
CDDcd147088.33E-2249101No hitNo description
PfamPF001704.3E-74979IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-65091No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-75190No hitNo description
PROSITE patternPS0003605267IPR004827Basic-leucine zipper domain
PfamPF141442.0E-32131206IPR025422Transcription factor TGA like domain
HamapMF_0096668.225306780IPR001282Glucose-6-phosphate dehydrogenase
SuperFamilySSF517354.92E-35334494IPR016040NAD(P)-binding domain
TIGRFAMsTIGR008711.4E-123336777IPR001282Glucose-6-phosphate dehydrogenase
PfamPF004796.1E-34336491IPR022674Glucose-6-phosphate dehydrogenase, NAD-binding
Gene3DG3DSA:3.40.50.7202.2E-46337490IPR016040NAD(P)-binding domain
PRINTSPR000799.4E-39447460IPR001282Glucose-6-phosphate dehydrogenase
PRINTSPR000799.4E-39471499IPR001282Glucose-6-phosphate dehydrogenase
SuperFamilySSF553471.54E-86481778No hitNo description
Gene3DG3DSA:3.30.360.109.4E-101491777No hitNo description
PfamPF027818.1E-89494776IPR022675Glucose-6-phosphate dehydrogenase, C-terminal
PRINTSPR000799.4E-39523540IPR001282Glucose-6-phosphate dehydrogenase
PRINTSPR000799.4E-39541557IPR001282Glucose-6-phosphate dehydrogenase
PRINTSPR000799.4E-39618644IPR001282Glucose-6-phosphate dehydrogenase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006006Biological Processglucose metabolic process
GO:0006098Biological Processpentose-phosphate shunt
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004345Molecular Functionglucose-6-phosphate dehydrogenase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0050661Molecular FunctionNADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 889 aa     Download sequence    Send to blast
MADASSRTDT STVLDTDDKN QMVDGQSGAI VPSNSSDRSD RSDKPMDQKV LRRLAQNREA  60
ARKSRLRKKA YVQQLESSKL KLASLEQEIN KARQQGIYIS SSGDQTHAMS GNGAMTFDLE  120
YARWLEEQNK QINELRTAVN AHASDSDLRL IVDGIMAHYD EIFRLKGVAA KADVFHILSG  180
MWKTPAERCF LWLGGFRSSE LLKLLVNQLE PLTEQQLLGL SNLQQSSQQA EDALSQGMEA  240
LQQSLADTLA GSLGPSGSSG NVANYMGQMA MAMGKLGTLE NFLRQADNLR QQTLHQMQRI  300
LTIRQAARAL LAIHDYFSRL RALSSLWLAR PREWEGWVGS NVGIFGYSRK TLTDEDLRSM  360
IEANLTCRVD HHENCDEKLN EFLKRTYYID AGYDNKDGMV KLNSRMSQIE GNCAANRIFY  420
LAVPQEALLD VALSLADSAQ TMQGWNRIII EKPFGFTGLS SHRVTQSLLS RFEEEQIYRI  480
DHLLGKDLIE NLTVLRFSNL VFEPLWSRTY IRNVQVIFSE ETAAEIQGRY FGNYGIIRDI  540
VHSHILQTIA LFAMEPPVSL DGEDIRDEKV KVLRSIRQVN LEDVVLGQLK DTSVKVDRYT  600
KSLTPTYFAA AMYIDNSRWD GVPFLIKTGI GLMENRAEIR IQFRHVPGNI YRERFGHDID  660
LDTNELILRD QPEEAILLKV NNKVPGLGLQ LDASELNLLY RDRYNVELPD SYEHLLLDVL  720
DGDSHLFMRS DEVAAAWNVL TPLIHEIDQN RIAPELYEAG GRGPVNAYYL AAKHGVRLDD  780
EWSAILLKVF PQIAPPGAAE AEKCMRRLST SFGTCGFPRG GAEKQSKGAV SLLGTTGSFT  840
CAANASRTSR DVKAVPESMI VPPVPFFRAN SDSGTGSLVD PTVMPFSER
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5ukw_A1e-11032778531487Glucose-6-phosphate 1-dehydrogenase
6e07_B1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_C1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_F1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_L1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_N1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_Q1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_T1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
6e07_W1e-1102687854510Glucose-6-phosphate 1-dehydrogenase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1219670.0AK121967.1 Oryza sativa Japonica Group cDNA clone:J033108F18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025879520.10.0glucose-6-phosphate 1-dehydrogenase 4, chloroplastic
TrEMBLA0A0E0CZR70.0A0A0E0CZR7_9ORYZ; Glucose-6-phosphate 1-dehydrogenase
STRINGOMERI03G14100.10.0(Oryza meridionalis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-130TGACG motif-binding factor 6