PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI03G13930.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 918aa MW: 102557 Da PI: 6.2295 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.4 | 4.2e-10 | 48 | 78 | 4 | 34 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 k+ rr+++NReAAr+sR+RKka++++Le OMERI03G13930.3 48 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 78 5899************************974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.2E-7 | 45 | 108 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.875 | 47 | 91 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 5.02E-22 | 49 | 101 | No hit | No description |
SuperFamily | SSF57959 | 2.25E-6 | 49 | 90 | No hit | No description |
Pfam | PF00170 | 4.5E-7 | 49 | 79 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-7 | 51 | 90 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 52 | 67 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.0E-32 | 131 | 206 | IPR025422 | Transcription factor TGA like domain |
Hamap | MF_00966 | 67.57 | 306 | 778 | IPR001282 | Glucose-6-phosphate dehydrogenase |
SuperFamily | SSF51735 | 5.12E-35 | 334 | 494 | IPR016040 | NAD(P)-binding domain |
TIGRFAMs | TIGR00871 | 2.8E-123 | 336 | 775 | IPR001282 | Glucose-6-phosphate dehydrogenase |
Pfam | PF00479 | 6.4E-34 | 336 | 491 | IPR022674 | Glucose-6-phosphate dehydrogenase, NAD-binding |
Gene3D | G3DSA:3.40.50.720 | 2.3E-46 | 337 | 490 | IPR016040 | NAD(P)-binding domain |
PRINTS | PR00079 | 1.2E-38 | 447 | 460 | IPR001282 | Glucose-6-phosphate dehydrogenase |
PRINTS | PR00079 | 1.2E-38 | 471 | 499 | IPR001282 | Glucose-6-phosphate dehydrogenase |
SuperFamily | SSF55347 | 1.6E-86 | 481 | 778 | No hit | No description |
Gene3D | G3DSA:3.30.360.10 | 2.2E-100 | 491 | 776 | No hit | No description |
Pfam | PF02781 | 1.9E-88 | 494 | 775 | IPR022675 | Glucose-6-phosphate dehydrogenase, C-terminal |
PRINTS | PR00079 | 1.2E-38 | 523 | 540 | IPR001282 | Glucose-6-phosphate dehydrogenase |
PRINTS | PR00079 | 1.2E-38 | 541 | 557 | IPR001282 | Glucose-6-phosphate dehydrogenase |
PRINTS | PR00079 | 1.2E-38 | 618 | 644 | IPR001282 | Glucose-6-phosphate dehydrogenase |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006006 | Biological Process | glucose metabolic process | ||||
GO:0006098 | Biological Process | pentose-phosphate shunt | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0004345 | Molecular Function | glucose-6-phosphate dehydrogenase activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0050661 | Molecular Function | NADP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 918 aa Download sequence Send to blast |
MADASSRTDT STVLDTDDKN QMVDGQSGAI VPSNSSDRSD RSDKPMDQKV LRRLAQNREA 60 ARKSRLRKKA YVQQLESSKL KLASLEQEIN KARQQGIYIS SSGDQTHAMS GNGAMTFDLE 120 YARWLEEQNK QINELRTAVN AHASDSDLRL IVDGIMAHYD EIFRLKGVAA KADVFHILSG 180 MWKTPAERCF LWLGGFRSSE LLKLLVNQLE PLTEQQLLGL SNLQQSSQQA EDALSQGMEA 240 LQQSLADTLA GSLGPSGSSG NVANYMGQMA MAMGKLGTLE NFLRQADNLR QQTLHQMQRI 300 LTIRQAARAL LAIHDYFSRL RALSSLWLAR PREWEGWVGS NVGIFGYSRK TLTDEDLRSM 360 IEANLTCRVD HHENCDEKLN EFLKRTYYID AGYDNKDGMV KLNSRMSQIE GNCAANRIFY 420 LAVPQEALLD VALSLADSAQ TMQGWNRIII EKPFGFTGLS SHRVTQSLLS RFEEEQIYRI 480 DHLLGKDLIE NLTVLRFSNL VFEPLWSRTY IRNVQVIFSE ETAAEIQGRY FGNYGIIRDI 540 VHSHILQTIA LFAMEPPVSL DGEDIRDEKV KVLRSIRQVN LEDVVLGQLK DTSVKVDRYT 600 KSLTPTYFAA AMYIDNSRWD GVPFLIKTGI GLMENRAEIR IQFRHVPGNI YRERFGHDID 660 LDTNELILRD QPEEAILLKV NNKVPGLGLQ LDASELNLLY RDRYNVELPD SYEHLLLDVL 720 DGDSHLFMRS DEVAAAWNVL TPLIHEIDQN RIAPELYEAG GRGPVNAYYL AAKHGIVKSV 780 SPNCTTRGSG GGEMHATPKS CSNPNYSAIT NYGQSNTRLK FVALSRDEGQ LAILQIIDTS 840 FGTCGFPRGG AEKQSKGAVS LLGTTGSFTC AANASRTSRD VKAVPESMIV PPVPFFRANS 900 DSGTGSLVDP TVMPFSER |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1qki_A | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_B | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_C | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_D | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_E | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_F | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_G | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
1qki_H | 1e-109 | 277 | 783 | 13 | 512 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE |
6e07_B | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_C | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_F | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_L | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_N | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_Q | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_T | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
6e07_W | 1e-110 | 268 | 783 | 4 | 513 | Glucose-6-phosphate 1-dehydrogenase |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK121967 | 0.0 | AK121967.1 Oryza sativa Japonica Group cDNA clone:J033108F18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0CZR6 | 0.0 | A0A0E0CZR6_9ORYZ; Glucose-6-phosphate 1-dehydrogenase | ||||
STRING | OMERI03G14100.1 | 0.0 | (Oryza meridionalis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-130 | TGACG motif-binding factor 6 |