PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI02G32150.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 358aa MW: 38118.4 Da PI: 9.5154 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.2 | 2.3e-15 | 278 | 326 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+ +e+ OMERI02G32150.2 278 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNDELQKKQDEML 326 79***************************************98876643 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-14 | 274 | 339 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.197 | 276 | 328 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.90E-24 | 278 | 330 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.6E-15 | 278 | 329 | No hit | No description |
SuperFamily | SSF57959 | 7.88E-11 | 278 | 328 | No hit | No description |
Pfam | PF00170 | 2.7E-13 | 278 | 328 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 281 | 296 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence Send to blast |
MDFPGGSGRQ QQQLPPMTPL PLARQGSVYS LTFDEFQSTL GGVGKDFGSM NMDELLRSIW 60 TAEESHAVGA ATTTTATTAS VAAAEHAAVG AAPVQRQGSL TLPRTLSQKT VDEVWRDMMC 120 FGGGGASAAP AAAEPPPPAH RQQTLGEITL EEFLVRAGVV REDMSGPPVP PAPTPTAPAV 180 PPPPPPQQQT PMLFGQSNVF PPMVPPLSLG NGLVSGAVGN GGGGAASLVS PVRPVSSNGF 240 GKMEGGDLSS LSPSPVPYVF NGGLRGRKAP GIEKVVERRQ RRMIKNRESA ARSRQRKQAY 300 MMELEAEVAK LKELNDELQK KQDEMLEQQK NEVLERMSRQ VGPTAKRICL RRTLTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK072062 | 0.0 | AK072062.1 Oryza sativa Japonica Group cDNA clone:J013109E06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015625853.1 | 0.0 | bZIP transcription factor 23 | ||||
Swissprot | Q6Z312 | 0.0 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | A0A0E0CRX4 | 0.0 | A0A0E0CRX4_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI02G31310.1 | 0.0 | (Oryza meridionalis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.2 | 4e-40 | ABRE binding factor 4 |