PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI02G19400.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 326aa MW: 35287.8 Da PI: 7.7028 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.9 | 8.1e-07 | 190 | 239 | 14 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R + +rsR RK+++i+ Le+ v++L++ +L+ ++ +l ++ +l +e+ OMERI02G19400.3 190 RRSGQRSRVRKLQYIADLERTVDSLQNIGADLAVRVASLFQLRNALSMEN 239 67889***************************999999999999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14703 | 5.14E-16 | 189 | 233 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-5 | 190 | 251 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MSRSPHLPPR CPPLGPQITR RDDSLFTQSC RFPSEDPFVG EPPCWLDDLL ADSGKSHTLP 60 PLRRACSDSD AILDVLTTFQ SPIYPIDEGD LQPVGEAGES FNAAAEGGGS GAGIEGSCVY 120 GPNSPRQKTR LTSSESSMVN AVLENVPSNP LQYLMIDATS GVNCNVGAAN GTGDIGDTVC 180 HADQEKSLKR RSGQRSRVRK LQYIADLERT VDSLQNIGAD LAVRVASLFQ LRNALSMENK 240 QLRRQITGLQ QAKLIKDGQT QMLKKETERL KQISVRHRRS RSVTSCFEAN SFGGGDPSAI 300 NWQMLDMSKL SLNGGAVVPP RGGYGM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 195 | RRSGQRS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK063644 | 0.0 | AK063644.1 Oryza sativa Japonica Group cDNA clone:001-118-H05, full insert sequence. | |||
GenBank | HQ324808 | 0.0 | HQ324808.1 Oryza sativa Japonica Group clone KCS608G03 b-zip protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015623493.1 | 0.0 | basic leucine zipper 34 | ||||
TrEMBL | A0A0E0CLM6 | 0.0 | A0A0E0CLM6_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI02G18670.1 | 0.0 | (Oryza meridionalis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-18 | bZIP family protein |