PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI02G07160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 251aa MW: 26426.7 Da PI: 10.0086 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.3 | 1.4e-07 | 150 | 192 | 21 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L eN++L++e+ +l+ +a+l +e+ OMERI02G07160.1 150 RPRKKMRLPEVQQLVRSLAVENDSLREEMRTLQRACAALSKEN 192 89*************************************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.9E-4 | 150 | 189 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MDCAGDDDAV AADIICSLRG ADLAGWTPPW WCSSSSKGAA REELIWPPVT RGKRSRRRSP 60 SAVAAAAGKK GRWARASPAS PLDYSGGSRS GSGSGSGSGS AASTSGGEDG AFCSPPGHRP 120 APATTKVGAM GRQQQLPFLA PSPLRPAGQR PRKKMRLPEV QQLVRSLAVE NDSLREEMRT 180 LQRACAALSK ENDKLEIRLE ISSSRNKPMI TEDLKGKQQI DQQSATQSIG GGFALPDLNI 240 PVQDVADGSV H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 155 | RPRKKMR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK107630 | 0.0 | AK107630.1 Oryza sativa Japonica Group cDNA clone:002-131-E03, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015626239.1 | 1e-151 | uncharacterized protein LOC4328519 isoform X1 | ||||
TrEMBL | A0A0E0CGS0 | 1e-179 | A0A0E0CGS0_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI02G07100.1 | 1e-180 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3790 | 29 | 51 |