PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 32832 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Family | bZIP | ||||||||
Protein Properties | Length: 246aa MW: 26974.7 Da PI: 5.1449 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.4 | 4.1e-10 | 107 | 167 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e krerr+q NR++A +sR +K ++ eLe+ ++e + aL e+e l+ e+++l++ + 32832 107 EEKRERRMQANRLSAAKSRMKKMRRMVELEQTCEETLTRVNALSAEVEALRAEYEELRARN 167 78*****************************998766666689999999999999888766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.8E-14 | 104 | 174 | No hit | No description |
SMART | SM00338 | 4.6E-13 | 105 | 169 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.5E-8 | 106 | 167 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.921 | 107 | 170 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-9 | 109 | 164 | No hit | No description |
CDD | cd14703 | 7.38E-12 | 110 | 159 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 112 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MSEISPLASP RAEANGEREW GAPRHERSLS ESLESAQTSA WAREAGRGGS DKGRETSARQ 60 GLPPTVIGAP AHHARARSYS QADAHEPSLR TVLEEPRGAN GGTTTEEEKR ERRMQANRLS 120 AAKSRMKKMR RMVELEQTCE ETLTRVNALS AEVEALRAEY EELRARNEEL TSTLSTPRGP 180 HLDSASKEFL QSLSGVDGSF TGMTIDAKGY DDEAFAETLN IARASSMERL FDSDGFFVSS 240 PRMDE* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP000587 | 0.0 | CP000587.1 Ostreococcus lucimarinus CCE9901 chromosome 7, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001419023.1 | 1e-177 | predicted protein | ||||
TrEMBL | A4S0R0 | 1e-176 | A4S0R0_OSTLU; Uncharacterized protein | ||||
STRING | ABO97316 | 1e-176 | (Ostreococcus 'lucimarinus') |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP12240 | 3 | 3 |
Link Out ? help Back to Top | |
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Phytozome | 32832 |