PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 32448
Organism
Ostreococcus lucimarinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family bZIP
Protein Properties Length: 418aa    MW: 42572.6 Da    PI: 10.9157
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
32448genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.1e-11271326459
             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
              +r rr+ +NRe+ArrsR+RK + ++ Le  +++L+ae +a  +  +  ++ +++l
   32448 271 MRRRRRMLSNRESARRSRRRKIEHVATLEGQIAQLTAELTAALQHTQGVEQRYQAL 326
             6899**********************************887777777777777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-14268332IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.588270333IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.41E-9271326No hitNo description
PfamPF001702.4E-9271330IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-8272344No hitNo description
PROSITE patternPS000360275290IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MDRVPSADDL MATFLWNAQR ASAGTPSNGT SGAAAHGARG VNRTPSQHEM ESYYNAMMAS  60
AAHGAHAGFG AYGALDGSIA HARDAAGGAG SAPGSREGTP GIPRVASIDV LRKMIMSGGL  120
GGGGGPGGAS PGSATPTTAA AFSAFASGAN LDALGAAVAM EQSKADDEGK KTTTTRSGAK  180
RSGRKPAAKA PAAKKAKAPP AKKAAAATTT RGGKAAKDAV ASPAKAAAKA PAAKAPAAKA  240
KAVAAKSEPL SSDLDHDSDG DSRDGDGNGD MRRRRRMLSN RESARRSRRR KIEHVATLEG  300
QIAQLTAELT AALQHTQGVE QRYQALVREN HTIRAEKDRL LQLLREAGPP GGGVTTPKTG  360
SAMERKSSLQ RISSNGDIKG ELGKGSPTIG LGTGFVPFRS LQSYENLLLL QQKSEKQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273290RRRMLSNRESARRSRRRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0005870.0CP000587.1 Ostreococcus lucimarinus CCE9901 chromosome 7, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001418599.10.0predicted protein
TrEMBLA4RZN20.0A4RZN2_OSTLU; Uncharacterized protein
STRINGABO968920.0(Ostreococcus 'lucimarinus')
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP822355