PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 30638 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Family | bZIP | ||||||||
Protein Properties | Length: 115aa MW: 12858.6 Da PI: 11.5406 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.7 | 2.6e-13 | 49 | 103 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +k+ rkq+NR +ArrsR+RK+ae+ e kv eLe e aL++e+++lkk a+ 30638 49 RKKLARKQSNRDSARRSRLRKQAETVEINVKVSELEREVVALREENQRLKKRLAE 103 79999**********************************************8775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.5E-10 | 44 | 102 | No hit | No description |
SMART | SM00338 | 4.8E-6 | 44 | 110 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.117 | 48 | 103 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-11 | 49 | 102 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.87E-7 | 50 | 100 | No hit | No description |
CDD | cd14702 | 1.89E-9 | 51 | 102 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 54 | 68 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009637 | Biological Process | response to blue light | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence Send to blast |
MLQNMTQTNP FWAAQAMLHR GIAMGQSAAL PQAGATTNGA SAATDELTRK KLARKQSNRD 60 SARRSRLRKQ AETVEINVKV SELEREVVAL REENQRLKKR LAENEGQRER KTTK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 68 | RRSRLRK |
2 | 62 | 69 | RRSRLRKQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP000583 | 0.0 | CP000583.1 Ostreococcus lucimarinus CCE9901 chromosome 3, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001416680.1 | 2e-76 | predicted protein | ||||
TrEMBL | A4RUJ0 | 4e-75 | A4RUJ0_OSTLU; Uncharacterized protein | ||||
STRING | ABO94973 | 7e-76 | (Ostreococcus 'lucimarinus') |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP4426 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01120.1 | 4e-08 | G-box binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | 30638 |