PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 27099 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Family | bZIP | ||||||||
Protein Properties | Length: 149aa MW: 16396.7 Da PI: 9.2402 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27 | 1e-08 | 78 | 136 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR++A rs +RK +++ Le+k eLe+ ++L+ e e++ va+l +e+ 27099 78 KRAKRILANRLSAARSKERKTRYVKGLEKKLNELEECERTLILERERMATAVATLAAEN 136 9****************************************************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.6E-9 | 74 | 138 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 76 | 139 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.61E-8 | 78 | 132 | No hit | No description |
Pfam | PF00170 | 1.2E-6 | 78 | 136 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.8E-8 | 78 | 133 | No hit | No description |
CDD | cd14703 | 2.01E-12 | 79 | 130 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MTPTPGKHRR SLSTPVDVLA SSALQRALDR ARDRHGGDDA PSRSDSLFGD EDAMAHAMAI 60 DLDDAPLDVR ELAMQDPKRA KRILANRLSA ARSKERKTRY VKGLEKKLNE LEECERTLIL 120 ERERMATAVA TLAAENSALQ MMMGTPAR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP000593 | 0.0 | CP000593.1 Ostreococcus lucimarinus CCE9901 chromosome 13, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001420935.1 | 1e-102 | predicted protein | ||||
TrEMBL | A4S6F6 | 1e-100 | A4S6F6_OSTLU; Uncharacterized protein | ||||
STRING | ABO99228 | 1e-101 | (Ostreococcus 'lucimarinus') |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP6785 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31370.5 | 5e-12 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | 27099 |