PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN539702.1_FGP009 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 180aa MW: 19832.1 Da PI: 5.7197 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.8 | 4.3e-12 | 48 | 80 | 2 | 34 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 +++k +rr+++NReAAr+sR+RKka+i++Le+ KN539702.1_FGP009 48 PRDKIQRRLAQNREAARKSRLRKKAYIQNLETS 80 57999*************************974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-6 | 47 | 110 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-8 | 49 | 84 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.531 | 49 | 91 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.27E-7 | 51 | 95 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.1E-9 | 52 | 97 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 54 | 69 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MAVAPPPLTE PKFESQLALP LQQHGDDQDD AALQEHASDS FEQEASKPRD KIQRRLAQNR 60 EAARKSRLRK KAYIQNLETS RMKLAHLEQE ITRARQQGAY INRSSNPSSL PAPIDSGVVT 120 FEVEYAQWVE EQGRQAAELR AALQAAAAEG PELRAAVEAA LAHYDRAGCE PEKLGVIPGA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN539702.1_FGP009 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT831514 | 0.0 | CT831514.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129B22, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025883355.1 | 2e-93 | transcription factor TGAL10-like isoform X3 | ||||
Refseq | XP_025883356.1 | 2e-93 | transcription factor TGAL10-like isoform X3 | ||||
Swissprot | Q6ZBS8 | 9e-95 | TGL10_ORYSJ; Transcription factor TGAL10 | ||||
TrEMBL | A0A0D3GWW9 | 1e-100 | A0A0D3GWW9_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI08G04690.1 | 1e-100 | (Oryza meridionalis) | ||||
STRING | OBART08G04650.1 | 1e-101 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29534 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10030.2 | 3e-34 | TGACG motif-binding factor 4 |
Publications ? help Back to Top | |||
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