PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN539371.1_FGP014 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 199aa MW: 22544.5 Da PI: 8.4847 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.3 | 4.5e-10 | 47 | 104 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr +r NR +A rs +R+ +i+eLe+kv+ L++e ++L +l l+ ++ + ++ KN539371.1_FGP014 47 KRVKRVLANRQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSSGMATQ 104 999******************************************9999887776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-16 | 43 | 107 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.565 | 45 | 108 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.0E-11 | 47 | 103 | No hit | No description |
SuperFamily | SSF57959 | 4.22E-11 | 47 | 97 | No hit | No description |
Pfam | PF00170 | 1.1E-9 | 47 | 105 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.36E-18 | 48 | 97 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MGKLSFAANG EPAKFSLEFG SGEFTPAEMK RIMADEKLAE MALADPKRVK RVLANRQSAA 60 RSKERRMRYI AELEQKVQIL QTEATTLSAQ LTLLQRDSSG MATQNNELKF RLQSMEQQAQ 120 LRDALNEALT AEVQRLKLAA NEVGDTSSSS NLAHQIQLRC QNQMLDLHKQ QQQQVEQIPF 180 YQLEQPEQQN GTARNHESK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor probably involved in vascular development and shoot tissue organization. Binds to the DNA sequence 5'-CCGAGTGTGCCCCTGG-3' present in the promoter region Box II of the phloem-specific rice tungro bacilliform virus (RTBV) promoter. May regulate tissue-specific expression of the RTBV promoter and virus replication. {ECO:0000269|PubMed:11390974, ECO:0000269|PubMed:12855676, ECO:0000269|PubMed:14704272, ECO:0000269|PubMed:9311985}. | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN539371.1_FGP014 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK108607 | 0.0 | AK108607.1 Oryza sativa Japonica Group cDNA clone:002-146-H05, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015613793.1 | 1e-137 | transcription factor RF2a-like isoform X1 | ||||
Swissprot | O22873 | 3e-49 | BZP18_ARATH; bZIP transcription factor 18 | ||||
Swissprot | Q69IL4 | 5e-49 | RF2A_ORYSJ; Transcription factor RF2a | ||||
TrEMBL | Q8LN44 | 1e-136 | Q8LN44_ORYSJ; BZIP transcription factor family protein, expressed | ||||
STRING | OS10T0531900-01 | 1e-137 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3536 | 35 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 2e-53 | bZIP family protein |