PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538962.1_FGP007
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 618aa    MW: 67833.3 Da    PI: 4.854
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538962.1_FGP007genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.93.4e-1694149459
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                         kr+rr+ +NRe+ArrsR+RK+a +  Le  v +L +eN +L+k+l+ +++++++ 
  KN538962.1_FGP007  94 AKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENASLQKRLSDMTQKYKQS 149
                        69*****************************************7777777776654 PP
2bZIP_151.52.3e-16432486458
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                         kr+rr+ +NRe+ArrsR+RK+a +  Le  v +L +eN +L+k l+ +++++++
  KN538962.1_FGP007 432 AKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENASLQKHLSDMTQKYKQ 486
                        69*****************************************666666666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-1887155IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.04793156IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-1393148No hitNo description
PfamPF001705.5E-1494148IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.99E-1295147No hitNo description
CDDcd147021.59E-1896146No hitNo description
PROSITE patternPS00036098113IPR004827Basic-leucine zipper domain
PfamPF124989.3E-17162258IPR020983Basic leucine-zipper, C-terminal
SMARTSM003381.2E-17425493IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.898431494IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-13431486No hitNo description
PfamPF001704.7E-14432486IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.06E-12433485No hitNo description
CDDcd147024.20E-18434484No hitNo description
PROSITE patternPS000360436451IPR004827Basic-leucine zipper domain
PfamPF124981.1E-16500596IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    Send to blast
MANCTIIDRQ DIYLHPFQEA KPQESSLGYL NLQASDTSQL VSQASFNGYG STRVTNSNAI  60
HEDYDQGKPA NSGTSKEQSD DDGDLEEDTD PVNAKRTRRM LSNRESARRS RKRKQAHLND  120
LESQVSQLRS ENASLQKRLS DMTQKYKQST TEYGNLQDDM NAMRRKVNIA EEAVRRVTGI  180
GLQLFTTSEM PASSMPFSSG VSDAASAAAA AALVEDNWTN CSIPDEAIPV PSAAMALRSP  240
SMRRVASLEN LQKRIHAGDV THFEAASALS LPEATACDNK YFFQYITENL GQYCRFFPSS  300
SGELWAIPFD EAKPQESSLG YLNLQASDTS QLVSQASFNG YGSTRVTNSN AIHEDYDQGK  360
PANSGTSKEQ SDDDGDLEED TDPVNAKRTR RVTNSNAIHE DDDQGKPANS GTSKEQSDDD  420
GDLEEDTDPV NAKRTRRMLS NRESARRSRK RKQAHLNDLE SQVSQLRSEN ASLQKHLSDM  480
TQKYKQSTTE YGNLQDDMNA MRRKVNIAEE AVRRVTGIGL QLFTTSEMPA SSMPFSSGVS  540
DAASAAAAAA LVEDDWTNCS LPDEAIPVPS AAMALRSPSM RRVASLENLQ KRIHAGDVTH  600
FEAASALSLP EATACDNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1445451RRSRKRK
2445452RRSRKRKQ
3447452SRKRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538962.1_FGP007
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2879810.0AK287981.1 Oryza sativa Japonica Group cDNA, clone: J075085P10, full insert sequence.
GenBankCT8376610.0CT837661.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015620819.11e-175light-inducible protein CPRF2 isoform X1
TrEMBLA0A0D3HWI01e-178A0A0D3HWI0_9ORYZ; Uncharacterized protein
STRINGOBART12G18120.11e-179(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.26e-22bZIP family protein