PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538737.1_FGP011
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 721aa    MW: 79141.6 Da    PI: 10.4663
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538737.1_FGP011genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.75.8e-082447127
                AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.k 27
                       ++y+GVr++k +g+Wv+eIr p   g k
  KN538737.1_FGP011 24 PQYRGVRRRK-WGKWVSEIRQP---GtK 47
                       68*****998.*********98...433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.1122556IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-92546IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    Send to blast
MEQQPQQQQQ AAAPAMAAGG GGGPQYRGVR RRKWGKWVSE IRQPGTKFAP FYIVLFVCVS  60
FALFGNRGDR PGGRGFDGLV SRMFVARYIG EAAALSSVSV DSCSAEAGQD ASVQQMVLDH  120
GSVSFGRFAA ESLSWEKRSV FDHNRRQEEL SNLTMPGLVA QKKAFFEEYY KRARLLKAQE  180
EINQTEATTE EGADHYDANG HNIQEPKLPA VSSEDPVARA PSSSFEPSTG VSSSGEKRCQ  240
DPHGLGYLTF NPLFSQITGS QNIQLEGSVS DQMHHAEGDF PCAAHTNTKD VLNHEPLERK  300
VLAPKHIVSN DNGENVVVSR IVLPIASLQR EHLKIDLERQ EPRKNAIFSS MPTKSSKEPS  360
TSVIHIPRID SRRNSENRNS QELKDPFHKR VEMKLRALSD RMNADKAAAS SRSVFHQHAE  420
RAVTSSRSSM ASCRSSTYQN GDRVATSSRS ALGQNADRVH ASSKSAQASR RSLREPHGAV  480
SLPRAVVNKG SHVSLVALSN STTQKFAASH PKHSVMPNSS QSASTLHTTQ VSLKRSAGVS  540
SVNNRPQNKR KQLSTPSTWD ENKLNRGYAR TSAPSSARSS SIGILPYKTA KAPKISNGKN  600
VAVKQTEMMQ KSTNGNHPAG GRNVQPKNVV SCNEQKRKLK TNQACCTHLD QTGEAKMAMT  660
KTKTILSEQS ARCRSADADD FLDQLRSCTS WISFRFLTHG RSAWLMAGAV QTKVWRQHEQ  720
G
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538737.1_FGP011
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0634570.0AK063457.1 Oryza sativa Japonica Group cDNA clone:001-115-G08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624662.10.0uncharacterized protein LOC4329682 isoform X1
RefseqXP_015624663.10.0uncharacterized protein LOC4329682 isoform X1
RefseqXP_015624664.10.0uncharacterized protein LOC4329682 isoform X1
RefseqXP_025878534.10.0uncharacterized protein LOC4329682 isoform X1
TrEMBLA0A0E0CM210.0A0A0E0CM21_9ORYZ; Uncharacterized protein
STRINGOMERI02G19560.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1150322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.18e-09ERF family protein