PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538691.1_FGP142
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 46aa    MW: 5512.29 Da    PI: 9.3666
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538691.1_FGP142genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.91.4e-151421152
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52
                       +kNRe+A rsR+RK+a+++eLe++v  L aeN aL+ +  +l
  KN538691.1_FGP142  1 MKNRESAERSRARKQAYLQELEQEVRLLRAENAALRHQCHQL 42
                       8***********************************987776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579591.5E-11142No hitNo description
PROSITE profilePS5021710.013142IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-13142No hitNo description
PfamPF001701.6E-12142IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    Send to blast
MKNRESAERS RARKQAYLQE LEQEVRLLRA ENAALRHQCH QLYLCA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538691.1_FGP142
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0039125e-62AP003912.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OJ1479_B11.
GenBankAP0149645e-62AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence.
GenBankCP0126165e-62CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649649.12e-20protein ABSCISIC ACID-INSENSITIVE 5
TrEMBLA0A0E0AYL53e-19A0A0E0AYL5_9ORYZ; Uncharacterized protein
STRINGOGLUM08G24220.15e-20(Oryza glumipatula)