PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN538687.1_FGP137 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 419aa MW: 47206.7 Da PI: 10.0384 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.3 | 4.4e-10 | 137 | 175 | 8 | 46 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 rr+++NReAAr+sR+RKka++++Le+ +L++ ++L+ KN538687.1_FGP137 137 RRLAQNREAARKSRLRKKAYVQQLEDSRMKLTQLEQELQ 175 9************************99888888776654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-5 | 129 | 199 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.4E-7 | 136 | 175 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.31E-7 | 136 | 177 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-8 | 137 | 179 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 137 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.772 | 137 | 176 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.9E-30 | 216 | 291 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
MPPPGPNYPR RCLSRRPRAN VPKDPARPRA RPTSCSPDRA AAIASIRCWV SWPRARGVSD 60 QHAIQCVGIG KPWLAWLRAT TSQPSKLGFF LNLFFWPDFS RLLISAQAQE FNMVFASPGT 120 DASTDPDIDK NIRMTLRRLA QNREAARKSR LRKKAYVQQL EDSRMKLTQL EQELQRARQQ 180 GIIISTSGDQ QRSTSENEAL AFNMEYMRWL EEHNKQINEL RSAVHTHAGD DDLQSIVSNF 240 MAHHEEIFRI KGLAAKADAL HVLSATWRTP LERCFLWLGG FRPSDLLKLL ADQLEPLTEQ 300 QLASICNQQQ SSQEAEETLS QGMEIIQDSL AKTVASQLGR AGSSSPSPSN AADHTAAALG 360 KIGDMESLLQ QADDLRMQSL QKMQRVLTTR QSARALLLIS DYFSRLRALN SLWIARPQQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN538687.1_FGP137 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012613 | 1e-150 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025881449.1 | 0.0 | transcription factor TGAL1-like isoform X1 | ||||
Swissprot | Q6IVC2 | 1e-143 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | A0A0E0HG88 | 0.0 | A0A0E0HG88_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA05G21900.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP16946 | 11 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-118 | bZIP family protein |
Publications ? help Back to Top | |||
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