PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538687.1_FGP025
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 402aa    MW: 43272.5 Da    PI: 7.259
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538687.1_FGP025genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.61.5e-14259302548
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lkk+
  KN538687.1_FGP025 259 RRQKRMIKNRESAARSRARKQAYTNELENKVLRLEEENERLKKQ 302
                        79***************************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-14253310No hitNo description
SMARTSM003385.6E-13255317IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.553257302IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-10259303No hitNo description
PfamPF001706.5E-12259302IPR004827Basic-leucine zipper domain
CDDcd147072.32E-23259304No hitNo description
PROSITE patternPS000360262277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MASHAGGSGG GGSGSGRDAG SAQRGPMQGL ARQGSLYGLT LNEVQSQLGE PLLSMNLDEL  60
LKSVFPDGAD LDGGGGSIAG QSQPALGLQR QGSITMPPEL SKKTVDEVWK GIQDVPKRGA  120
EEGDRRRRER QPTLGEMTLE DFLVKAGVVT DPNDLPGNMD VVGGAAAAAA GTSDLNAGAQ  180
WLQQYHQQAL EPQHPSIGAP YMATHLAPQP LAVATGAVLD PIYSDGQITS PMLGALSDPQ  240
TPGRKRGATG EIADKLVERR QKRMIKNRES AARSRARKQA YTNELENKVL RLEEENERLK  300
KQKFRNEVNH AALVLEIGFS FRRRPDPAKE AAAECAGGEV TTVALRRRRR RGGRGQCEPG  360
EAEAVEQVES QAELEAKRLP VDDTRSHHME LFRDGCRFHI ST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128DRRRRE
2345353RRRRRRGGR
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538687.1_FGP025
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0633980.0AK063398.1 Oryza sativa Japonica Group cDNA clone:001-114-H11, full insert sequence.
GenBankHQ8588130.0HQ858813.1 Oryza sativa Japonica Group isolate UT1193 bZIP transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638735.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
SwissprotQ9LES31e-69AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0E0HG560.0A0A0E0HG56_ORYNI; Uncharacterized protein
STRINGOS05T0489700-010.0(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-55ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]