PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN538686.1_FGP096 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 118aa MW: 13090.8 Da PI: 10.938 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.4e-15 | 61 | 102 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r +r++kNRe+A rsR+RK+a++ eLe+k+ Le+eNk+L+ KN538686.1_FGP096 61 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENKRLR 102 6899*************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.4E-10 | 57 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.22 | 59 | 102 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-12 | 61 | 102 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.12E-18 | 61 | 102 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-13 | 61 | 103 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-11 | 61 | 103 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 64 | 79 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence Send to blast |
MSSHHGSGGV SRQGSLCGLA LSEVEGQLHG VNLDDLLRTG GGHKRAPAAG EGAAAEKTVE 60 RRKKRMIKNR ESAARSRARK QAYTNELENK ISRLEEENKR LRMHKVSKPV FVHHFQEP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN538686.1_FGP096 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC118674 | 5e-58 | AC118674.3 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence. | |||
GenBank | AP014959 | 5e-58 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015694773.1 | 6e-30 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 7e-21 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | J3MP98 | 2e-36 | J3MP98_ORYBR; Uncharacterized protein | ||||
STRING | OB07G32300.1 | 3e-37 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 2e-21 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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