PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AMDW01038896.1_FGP001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 161aa MW: 18605.1 Da PI: 9.6909 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.4 | 4.1e-10 | 3 | 38 | 8 | 43 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 rr+++NReAAr+sR+RKka+i++Le+ +L + + AMDW01038896.1_FGP001 3 RRLAQNREAARKSRLRKKAYIQQLETSRLKLAQLEQ 38 9************************85444443333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.703 | 1 | 42 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.0E-4 | 1 | 60 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.5E-8 | 3 | 39 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-8 | 3 | 51 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 3 | 18 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.01E-7 | 3 | 46 | No hit | No description |
Pfam | PF14144 | 6.3E-26 | 88 | 161 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
VLRRLAQNRE AARKSRLRKK AYIQQLETSR LKLAQLEQEL QRARQQAVYA NGSLREPNLG 60 FTGPIDPGAL GFEIKYSHWV DEQNRNTGEL RNALLQGQTS DQDLELKLLV EAGLDNYSRL 120 FEMKEEAANS DVFYIMSGMW KTPTERFFLW IGGFRPSEVL K |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AMDW01038896.1_FGP001 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK073715 | 0.0 | AK073715.1 Oryza sativa Japonica Group cDNA clone:J033059P06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015636710.1 | 1e-112 | transcription factor TGAL6 isoform X1 | ||||
Refseq | XP_015636711.1 | 1e-112 | transcription factor TGAL6 isoform X1 | ||||
Refseq | XP_015636712.1 | 1e-112 | transcription factor TGAL6 isoform X1 | ||||
Refseq | XP_015636713.1 | 1e-112 | transcription factor TGAL6 isoform X2 | ||||
Refseq | XP_015636714.1 | 1e-112 | transcription factor TGAL6 isoform X2 | ||||
Refseq | XP_015636715.1 | 1e-112 | transcription factor TGAL6 isoform X2 | ||||
Refseq | XP_025880677.1 | 1e-112 | transcription factor TGAL6 isoform X1 | ||||
Refseq | XP_025880678.1 | 1e-112 | transcription factor TGAL6 isoform X3 | ||||
Swissprot | A0A0P0WFC8 | 1e-113 | TGAL6_ORYSJ; Transcription factor TGAL6 | ||||
TrEMBL | A0A0D3G046 | 1e-111 | A0A0D3G046_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0D3G049 | 1e-111 | A0A0D3G049_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0D9ZRD4 | 1e-111 | A0A0D9ZRD4_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0D9ZRD8 | 1e-111 | A0A0D9ZRD8_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0GKM9 | 1e-111 | A0A0E0GKM9_ORYNI; Uncharacterized protein | ||||
TrEMBL | A0A0E0PEM0 | 1e-111 | A0A0E0PEM0_ORYRU; Uncharacterized protein | ||||
TrEMBL | A0A0E0PEM4 | 1e-111 | A0A0E0PEM4_ORYRU; Uncharacterized protein | ||||
TrEMBL | A2XY14 | 1e-111 | A2XY14_ORYSI; Uncharacterized protein | ||||
TrEMBL | I1PPQ2 | 1e-111 | I1PPQ2_ORYGL; Uncharacterized protein | ||||
STRING | OGLUM04G26680.1 | 1e-111 | (Oryza glumipatula) | ||||
STRING | OS04T0637000-01 | 1e-111 | (Oryza sativa) | ||||
STRING | ONIVA03G13630.1 | 1e-111 | (Oryza nivara) | ||||
STRING | ORGLA04G0217100.1 | 1e-112 | (Oryza glaberrima) | ||||
STRING | OBART04G25140.2 | 1e-111 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3571 | 38 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.6 | 5e-57 | bZIP family protein |