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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OGLUM11G02280.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GRAS |
| Protein Properties |
Length: 320aa MW: 35108.9 Da PI: 5.7605 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM11G02280.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 188.9 | 3.5e-58 | 3 | 318 | 47 | 289 |
GRAS 47 eALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpe 137
La+rl+r v+ + +al ps + ++ aa++ f+e+sP++k+++++ N+aI+eave+e+ vH++ ++ +q+ QW+ Ll++L Rpe
OGLUM11G02280.1 3 DCLARRLLRPVQAITDALiDPSVYL--DRRSVRAARRGFFELSPFPKVAFVVGNRAIVEAVENESLVHVVGMSgpFTQPCQWIQLLHELRRRPE 94
6799999999999999885444443..34555578899**********************************86679****************9 PP
GRAS 138 gpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL....rvkpgEalaVnlvlqlhrll............ 214
gpp +R+T+v++ + e l +++e ++ Aeelg++f+f+ v+ +ledl++++L ++k+gEal+V++ lqlhrll
OGLUM11G02280.1 95 GPPrVVRLTVVHD----DGELLAKMEELVSDEAEELGMEFQFHG-VVGQLEDLDFSNLrnvlEIKSGEALVVSCTLQLHRLLaadddamyssrs 183
988789*******....***************************.7999****9999866667889**************************** PP
GRAS 215 ........................................................desvsleserdevLklvkslsPkvvvvveqeadhnses 252
+ +++l ++L++v+ lsPk++vv+eq+adhn+ s
OGLUM11G02280.1 184 ahlnqmasiaqlqhmavnscpsssgggsvqykdddpyrspatpltfvsppvstphfQTPAAL----ASFLSAVRALSPKILVVAEQDADHNGVS 273
*************************************************9986555555555....55************************** PP
GRAS 253 Flerflealeyysalfdsleaklpres........eerikvErel 289
F +rf+eal++y+a+fdsl+a ++++s +er+ vEr++
OGLUM11G02280.1 274 FRKRFCEALHHYAAVFDSLDAAAATTSaasrlwspDERAQVERVV 318
*******************99988888655556666666666665 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MVDCLARRLL RPVQAITDAL IDPSVYLDRR SVRAARRGFF ELSPFPKVAF VVGNRAIVEA 60
VENESLVHVV GMSGPFTQPC QWIQLLHELR RRPEGPPRVV RLTVVHDDGE LLAKMEELVS 120
DEAEELGMEF QFHGVVGQLE DLDFSNLRNV LEIKSGEALV VSCTLQLHRL LAADDDAMYS 180
SRSAHLNQMA SIAQLQHMAV NSCPSSSGGG SVQYKDDDPY RSPATPLTFV SPPVSTPHFQ 240
TPAALASFLS AVRALSPKIL VVAEQDADHN GVSFRKRFCE ALHHYAAVFD SLDAAAATTS 300
AASRLWSPDE RAQVERVVVG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |
