 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OGLUM10G18300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 292aa MW: 30456.5 Da PI: 6.6294 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM10G18300.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 11.5 | 0.00058 | 136 | 153 | 38 | 55 |
STCHHHHHHHHHHHHHHH CS
HLH 38 lsKaeiLekAveYIksLq 55
+Ka++L ++++Y+k+Lq
OGLUM10G18300.1 136 TDKASMLDEVIDYLKQLQ 153
79***************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
| GO:0009506 | Cellular Component | plasmodesma |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MNQCVPSWDL DDPVGGGGIG GGGGGGHRVV SGGGGGFMPV AVPTSDQYYE VAELTWKKGN 60
ISSHGLLLNR PAPPKFPPHQ QLQAAMGGGG GGGVVGDRET LEAVVGEAAA RSSSSSHLAA 120
RARPVPAPWL GSVGVTDKAS MLDEVIDYLK QLQAQVQVMS RMGSMMMPMG MAMPQLQMSV 180
MAQMAQMAQI GLSMMNMGQA GGYAPMHMHT PPFLPVSWDA AASSSSAAAA DRPPQPTGAA 240
TSDAFSAFLA SQAAQQNAQQ PNGMEAYNRM MAMYQKLNHQ QQQQDQPSNS RQ
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK287925 | 0.0 | AK287925.1 Oryza sativa Japonica Group cDNA, clone: J065218F01, full insert sequence. |
