PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G16680.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 395aa    MW: 42602.5 Da    PI: 6.8009
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G16680.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.74.3e-072523001462
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                      R +A rs +R+  +i+eLe+kv+ L++e ++L  +l  l+  ++ + ++
  OGLUM10G16680.1 252 RQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSSGMATQ 300
                      89**********************************9999887766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147031.66E-16231293No hitNo description
SMARTSM003384.5E-9244303IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-6252293No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-7252298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MNTTSANELM MHRHVQAAPY AAAPQQQGGK QRAPGLPPTP PPPPAAASSH SSHGDVCMDE  60
TARGGLLPPR KAHRRSRSDV PFGYFQPLPP PLPKMEAGGG WALPGCGGAG DVDLLNAYMS  120
LEGMGGADGL NNSDGDSRGS SMRTNGADSS ENESEDYVGA DSQALLWGGA GGGEAAGKKR  180
RNNAAGETAA RHARSLSMDS LMGKLSFAAN GEPAKFSLEF GSGEFTPAEM KRIMADEKLA  240
EMALADPKRV KRQSAARSKE RRMRYIAELE QKVQILQTEA TTLSAQLTLL QRDSSGMATQ  300
NNELKFRLQS MEQQAQLRDA LNEALTAEVQ RLKLAANEVG DTSSSSNLAH QIQLRCQNQM  360
LDLHKQQQQQ VEQIPFYQLE QPEQQNGTAR NHESK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1086070.0AK108607.1 Oryza sativa Japonica Group cDNA clone:002-146-H05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015613793.10.0transcription factor RF2a-like isoform X1
TrEMBLA0A0E0BD140.0A0A0E0BD14_9ORYZ; Uncharacterized protein
STRINGOGLUM10G16680.10.0(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35363576
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.32e-59bZIP family protein